Protein–RNA interactions for Protein: Q8VE09

Ttc39c, Tetratricopeptide repeat protein 39C, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39cQ8VE09 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ttc39cQ8VE09 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ttc39cQ8VE09 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ttc39cQ8VE09 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Ttc39cQ8VE09 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Ttc39cQ8VE09 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ttc39cQ8VE09 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ttc39cQ8VE09 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ttc39cQ8VE09 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ttc39cQ8VE09 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ttc39cQ8VE09 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ttc39cQ8VE09 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ttc39cQ8VE09 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Snord23-201ENSMUST00000116828 109 ntBASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Gm3828-201ENSMUST00000121817 257 ntBASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Gm44216-201ENSMUST00000203942 157 ntBASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Gm9111-201ENSMUST00000219394 709 ntBASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ttc39cQ8VE09 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Gm14497-201ENSMUST00000119537 580 ntBASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Gm11952-201ENSMUST00000121172 821 ntBASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Gm23218-201ENSMUST00000158124 276 ntBASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Gm19587-201ENSMUST00000191395 545 ntBASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.29□□□□□ -0.6
Ttc39cQ8VE09 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms