Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Gm10263-201ENSMUST00000085163 300 ntBASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nup88Q8CEC0 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Gm13600-201ENSMUST00000117949 744 ntBASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Gm25951-201ENSMUST00000175330 64 ntBASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.91□□□□□ -0.34
Nup88Q8CEC0 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Gm42816-201ENSMUST00000198433 325 ntBASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Gm3726-201ENSMUST00000203110 785 ntBASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Gm5805-201ENSMUST00000072779 456 ntBASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nup88Q8CEC0 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Gm13117-201ENSMUST00000120894 691 ntBASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Gm12030-201ENSMUST00000121917 223 ntBASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Gm22846-201ENSMUST00000157706 270 ntBASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Gm30671-201ENSMUST00000214898 318 ntBASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.9□□□□□ -0.34
Nup88Q8CEC0 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nup88Q8CEC0 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nup88Q8CEC0 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.35
Nup88Q8CEC0 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Nup88Q8CEC0 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nup88Q8CEC0 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Nup88Q8CEC0 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nup88Q8CEC0 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup88Q8CEC0 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nup88Q8CEC0 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms