Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 CT009713.2-201ENSMUST00000225532 1149 ntBASIC12.72□□□□□ -0.37
Alx1Q8C8B0 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Alx1Q8C8B0 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.71□□□□□ -0.37
Alx1Q8C8B0 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Gm23061-201ENSMUST00000102348 116 ntBASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Gm23612-201ENSMUST00000103823 110 ntBASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Gm22937-201ENSMUST00000103954 131 ntBASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Gm13022-201ENSMUST00000121181 285 ntBASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Gm15196-201ENSMUST00000121406 482 ntBASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Gm23576-201ENSMUST00000179918 110 ntBASIC12.71□□□□□ -0.37
Alx1Q8C8B0 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Gm18463-201ENSMUST00000207258 474 ntBASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Gm18460-201ENSMUST00000208088 464 ntBASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Alx1Q8C8B0 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Alx1Q8C8B0 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Alx1Q8C8B0 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC12.71□□□□□ -0.38
Alx1Q8C8B0 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Alx1Q8C8B0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Alx1Q8C8B0 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.71□□□□□ -0.38
Alx1Q8C8B0 Gm29101-201ENSMUST00000188329 1471 ntBASIC12.71□□□□□ -0.38
Alx1Q8C8B0 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Alx1Q8C8B0 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Alx1Q8C8B0 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Alx1Q8C8B0 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Alx1Q8C8B0 Gm12097-201ENSMUST00000121523 1414 ntBASIC12.71□□□□□ -0.38
Alx1Q8C8B0 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Gm12745-201ENSMUST00000121767 214 ntBASIC12.7□□□□□ -0.38
Alx1Q8C8B0 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Alx1Q8C8B0 AC154220.1-201ENSMUST00000225033 1705 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms