Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Platr10-202ENSMUST00000191479 818 ntBASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Gm2517-201ENSMUST00000215651 348 ntBASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Ntng1-201ENSMUST00000051253 327 ntBASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Gm37697-201ENSMUST00000195680 1844 ntBASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Rims2-204ENSMUST00000226410 3685 ntBASIC10.76□□□□□ -0.69
Scaf4Q6PFF0 Gm21115-201ENSMUST00000187565 2578 ntBASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 AC154220.1-201ENSMUST00000225033 1705 ntBASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Mipep-ps-201ENSMUST00000177439 291 ntBASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Mir7051-201ENSMUST00000184167 73 ntBASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Gm19091-201ENSMUST00000208120 978 ntBASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Gm21142-201ENSMUST00000179999 2604 ntBASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scaf4Q6PFF0 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Gm22920-201ENSMUST00000102175 109 ntBASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Gm7851-201ENSMUST00000117574 323 ntBASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Gm13809-201ENSMUST00000117921 597 ntBASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.74□□□□□ -0.69
Scaf4Q6PFF0 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 134.3 ms