Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Sept6-202ENSMUST00000060474 3457 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Pde1c-204ENSMUST00000164752 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Gm45867-201ENSMUST00000208201 2317 ntBASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.34□□□□□ -0.75
Rnf220Q6PDX6 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.75
Rnf220Q6PDX6 Rpgrip1-213ENSMUST00000181401 3963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Txk-206ENSMUST00000198464 2271 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Olfr169-203ENSMUST00000215476 2476 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Gm43135-201ENSMUST00000196442 3462 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Ephb4-205ENSMUST00000166239 3741 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Gm44651-201ENSMUST00000207343 372 ntBASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Gm18065-201ENSMUST00000221395 526 ntBASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Bcl2l11-201ENSMUST00000019281 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Parp3-201ENSMUST00000067218 2962 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Rap1gds1-201ENSMUST00000029796 3383 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Slco5a1-206ENSMUST00000147606 3615 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Tmem63a-201ENSMUST00000027800 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Gm15947-201ENSMUST00000161395 2742 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 AC123534.1-202ENSMUST00000224256 1837 ntBASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 AC158777.1-201ENSMUST00000226216 1724 ntBASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Rnf220Q6PDX6 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Npnt-205ENSMUST00000117456 3383 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Fut10-204ENSMUST00000161788 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 BC005624-201ENSMUST00000028205 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Boc-201ENSMUST00000114634 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Ftsj3-201ENSMUST00000021048 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Slc28a2-202ENSMUST00000110524 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf220Q6PDX6 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 110.9 ms