Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Vps54Q5SPW0 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vps54Q5SPW0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vps54Q5SPW0 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Vps54Q5SPW0 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC13.08□□□□□ -0.31
Vps54Q5SPW0 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Vps54Q5SPW0 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Vps54Q5SPW0 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Gm9372-201ENSMUST00000168454 430 ntBASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Gm26119-201ENSMUST00000175601 104 ntBASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Gm7719-201ENSMUST00000182374 975 ntBASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Gm44605-201ENSMUST00000206892 949 ntBASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Gm8162-201ENSMUST00000213951 665 ntBASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Gm6390-201ENSMUST00000215034 589 ntBASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Gm8170-201ENSMUST00000218581 945 ntBASIC13.08□□□□□ -0.32
Vps54Q5SPW0 AC130477.1-201ENSMUST00000226982 420 ntBASIC13.08□□□□□ -0.32
Vps54Q5SPW0 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Gm38271-201ENSMUST00000192296 1603 ntBASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Vps54Q5SPW0 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Gm15782-201ENSMUST00000121073 445 ntBASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Vps54Q5SPW0 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms