Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 4933424L21Rik-201ENSMUST00000142486 1186 ntTSL 5 BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Gm25947-201ENSMUST00000180343 110 ntBASIC10.05□□□□□ -0.8
Spg11Q3UHA3 6430531B16Rik-205ENSMUST00000210254 952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Olfr418-201ENSMUST00000059754 991 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Gm26205-201ENSMUST00000082907 134 ntBASIC10.05□□□□□ -0.8
Spg11Q3UHA3 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Psd3-211ENSMUST00000178529 828 ntTSL 5 BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Gm6008-201ENSMUST00000206542 874 ntBASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Gm7424-201ENSMUST00000206919 902 ntBASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 AC125223.1-201ENSMUST00000224004 749 ntBASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Ccdc173-201ENSMUST00000094942 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Gm37912-201ENSMUST00000191895 3076 ntBASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Spg11Q3UHA3 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Mkln1os-201ENSMUST00000139185 1864 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm14278-201ENSMUST00000117381 878 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm11235-201ENSMUST00000117763 333 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm13623-201ENSMUST00000118359 625 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm14983-201ENSMUST00000121551 323 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm16058-201ENSMUST00000124392 427 ntTSL 2 BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 1700092M07Rik-201ENSMUST00000163172 380 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm26241-201ENSMUST00000174944 101 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm23976-201ENSMUST00000175001 101 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm22463-201ENSMUST00000175274 101 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm22547-201ENSMUST00000175281 101 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm22913-201ENSMUST00000175297 101 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm23282-201ENSMUST00000175306 101 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm25972-201ENSMUST00000175374 101 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm22414-201ENSMUST00000175466 101 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm26235-201ENSMUST00000175533 101 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm25084-201ENSMUST00000175556 101 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm24973-201ENSMUST00000175588 101 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm23292-201ENSMUST00000175618 101 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm23646-201ENSMUST00000178119 101 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm24643-201ENSMUST00000178305 101 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm24302-201ENSMUST00000178350 101 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm26386-201ENSMUST00000178407 101 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm25458-201ENSMUST00000178981 101 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm22825-201ENSMUST00000179444 101 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm42803-201ENSMUST00000201051 451 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 AC105950.2-201ENSMUST00000220938 368 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Arl15-202ENSMUST00000224068 1002 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Defa21-201ENSMUST00000076754 418 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm8420-201ENSMUST00000097103 598 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Gm38042-201ENSMUST00000191614 5208 ntBASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Spg11Q3UHA3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms