Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CiitaP79621 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CiitaP79621 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC11.86□□□□□ -0.51
CiitaP79621 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.86□□□□□ -0.51
CiitaP79621 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.86□□□□□ -0.51
CiitaP79621 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CiitaP79621 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.86□□□□□ -0.51
CiitaP79621 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
CiitaP79621 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CiitaP79621 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CiitaP79621 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.86□□□□□ -0.51
CiitaP79621 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CiitaP79621 Gm15136-201ENSMUST00000120552 533 ntBASIC11.86□□□□□ -0.51
CiitaP79621 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CiitaP79621 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Gm43506-201ENSMUST00000200675 753 ntBASIC11.86□□□□□ -0.51
CiitaP79621 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.86□□□□□ -0.51
CiitaP79621 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.86□□□□□ -0.51
CiitaP79621 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.86□□□□□ -0.51
CiitaP79621 Gm26782-203ENSMUST00000227103 751 ntBASIC11.86□□□□□ -0.51
CiitaP79621 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
CiitaP79621 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CiitaP79621 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.86□□□□□ -0.51
CiitaP79621 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CiitaP79621 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.85□□□□□ -0.51
CiitaP79621 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CiitaP79621 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CiitaP79621 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CiitaP79621 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CiitaP79621 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.85□□□□□ -0.51
CiitaP79621 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CiitaP79621 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CiitaP79621 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CiitaP79621 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.85□□□□□ -0.51
CiitaP79621 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CiitaP79621 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CiitaP79621 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CiitaP79621 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.85□□□□□ -0.51
CiitaP79621 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
CiitaP79621 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.85□□□□□ -0.51
CiitaP79621 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
CiitaP79621 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CiitaP79621 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
CiitaP79621 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CiitaP79621 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC11.85□□□□□ -0.51
CiitaP79621 Gm13039-201ENSMUST00000118638 794 ntBASIC11.85□□□□□ -0.51
CiitaP79621 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.85□□□□□ -0.51
CiitaP79621 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.85□□□□□ -0.51
CiitaP79621 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.85□□□□□ -0.51
CiitaP79621 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.85□□□□□ -0.51
CiitaP79621 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC11.85□□□□□ -0.51
CiitaP79621 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.85□□□□□ -0.51
CiitaP79621 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CiitaP79621 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CiitaP79621 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CiitaP79621 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
CiitaP79621 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
CiitaP79621 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
CiitaP79621 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CiitaP79621 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CiitaP79621 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CiitaP79621 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CiitaP79621 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.85□□□□□ -0.51
CiitaP79621 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CiitaP79621 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CiitaP79621 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
CiitaP79621 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CiitaP79621 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC11.84□□□□□ -0.51
CiitaP79621 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.84□□□□□ -0.51
CiitaP79621 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CiitaP79621 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms