Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Gm17796-201ENSMUST00000189015 1213 ntBASIC9.18□□□□□ -0.94
Usf3B2RUQ2 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usf3B2RUQ2 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC9.18□□□□□ -0.94
Usf3B2RUQ2 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usf3B2RUQ2 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usf3B2RUQ2 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usf3B2RUQ2 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC9.18□□□□□ -0.94
Usf3B2RUQ2 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.18□□□□□ -0.94
Usf3B2RUQ2 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usf3B2RUQ2 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Usf3B2RUQ2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usf3B2RUQ2 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usf3B2RUQ2 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usf3B2RUQ2 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usf3B2RUQ2 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usf3B2RUQ2 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Usf3B2RUQ2 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Usf3B2RUQ2 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Usf3B2RUQ2 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usf3B2RUQ2 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Usf3B2RUQ2 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Gm23255-201ENSMUST00000102244 110 ntBASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Gm11942-201ENSMUST00000180255 345 ntBASIC9.17□□□□□ -0.94
Usf3B2RUQ2 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.17□□□□□ -0.94
Usf3B2RUQ2 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Gm3283-201ENSMUST00000199319 1350 ntBASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Gm18776-201ENSMUST00000188833 654 ntBASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Gm34379-201ENSMUST00000195036 290 ntBASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Gm45310-201ENSMUST00000210436 275 ntBASIC9.17□□□□□ -0.94
Usf3B2RUQ2 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 AC153152.3-201ENSMUST00000222188 1135 ntBASIC9.17□□□□□ -0.94
Usf3B2RUQ2 AC158388.3-202ENSMUST00000225517 775 ntBASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Olfr584-201ENSMUST00000098210 964 ntBASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Usf3B2RUQ2 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Usf3B2RUQ2 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usf3B2RUQ2 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usf3B2RUQ2 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.16□□□□□ -0.94
Usf3B2RUQ2 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usf3B2RUQ2 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usf3B2RUQ2 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usf3B2RUQ2 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC9.16□□□□□ -0.94
Usf3B2RUQ2 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC9.16□□□□□ -0.94
Usf3B2RUQ2 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usf3B2RUQ2 Gm9353-201ENSMUST00000200472 604 ntBASIC9.16□□□□□ -0.94
Usf3B2RUQ2 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Usf3B2RUQ2 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms