Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Gm14270-201ENSMUST00000118388 846 ntBASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Gm10169-201ENSMUST00000121822 348 ntBASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Mir7032-201ENSMUST00000185154 79 ntBASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Gm42518-201ENSMUST00000196277 938 ntBASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Gm45191-201ENSMUST00000205846 5439 ntBASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Chmp2aQ9DB34 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Gm12663-201ENSMUST00000118481 958 ntBASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Gm12274-201ENSMUST00000120062 385 ntBASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Gm26134-201ENSMUST00000178484 110 ntBASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Gm9358-201ENSMUST00000183067 927 ntBASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Gm5100-201ENSMUST00000195631 589 ntBASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Chmp2aQ9DB34 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.41□□□□□ -0.58
Chmp2aQ9DB34 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms