Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
U2af1Q9D883 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC14.37□□□□□ -0.11
U2af1Q9D883 Gm22146-201ENSMUST00000157397 288 ntBASIC14.37□□□□□ -0.11
U2af1Q9D883 Gm18014-201ENSMUST00000183369 817 ntBASIC14.37□□□□□ -0.11
U2af1Q9D883 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC14.37□□□□□ -0.11
U2af1Q9D883 Gm19918-201ENSMUST00000194858 400 ntBASIC14.37□□□□□ -0.11
U2af1Q9D883 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
U2af1Q9D883 Gm3433-201ENSMUST00000210149 1058 ntBASIC14.37□□□□□ -0.11
U2af1Q9D883 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
U2af1Q9D883 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
U2af1Q9D883 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
U2af1Q9D883 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC14.37□□□□□ -0.11
U2af1Q9D883 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
U2af1Q9D883 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
U2af1Q9D883 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
U2af1Q9D883 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC14.37□□□□□ -0.11
U2af1Q9D883 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
U2af1Q9D883 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
U2af1Q9D883 Gm3372-201ENSMUST00000198806 1792 ntBASIC14.37□□□□□ -0.11
U2af1Q9D883 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
U2af1Q9D883 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
U2af1Q9D883 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC14.36□□□□□ -0.11
U2af1Q9D883 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
U2af1Q9D883 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
U2af1Q9D883 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
U2af1Q9D883 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
U2af1Q9D883 Gm38140-201ENSMUST00000193617 2755 ntBASIC14.36□□□□□ -0.11
U2af1Q9D883 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
U2af1Q9D883 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC14.36□□□□□ -0.11
U2af1Q9D883 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
U2af1Q9D883 Gm11619-201ENSMUST00000117474 237 ntBASIC14.36□□□□□ -0.11
U2af1Q9D883 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
U2af1Q9D883 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
U2af1Q9D883 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC14.36□□□□□ -0.11
U2af1Q9D883 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
U2af1Q9D883 Gm5700-201ENSMUST00000191483 989 ntBASIC14.36□□□□□ -0.11
U2af1Q9D883 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC14.36□□□□□ -0.11
U2af1Q9D883 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC14.36□□□□□ -0.11
U2af1Q9D883 Gm4903-201ENSMUST00000210462 405 ntBASIC14.36□□□□□ -0.11
U2af1Q9D883 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
U2af1Q9D883 AC102847.1-202ENSMUST00000226313 1245 ntBASIC14.36□□□□□ -0.11
U2af1Q9D883 CT025679.1-201ENSMUST00000227106 449 ntBASIC14.36□□□□□ -0.11
U2af1Q9D883 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
U2af1Q9D883 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
U2af1Q9D883 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
U2af1Q9D883 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
U2af1Q9D883 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
U2af1Q9D883 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
U2af1Q9D883 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
U2af1Q9D883 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
U2af1Q9D883 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 Gm6768-201ENSMUST00000022467 1878 ntBASIC14.35□□□□□ -0.11
U2af1Q9D883 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
U2af1Q9D883 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
U2af1Q9D883 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 Gm37058-201ENSMUST00000193393 1644 ntBASIC14.35□□□□□ -0.11
U2af1Q9D883 Gm44740-201ENSMUST00000205603 1614 ntBASIC14.35□□□□□ -0.11
U2af1Q9D883 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC14.35□□□□□ -0.11
U2af1Q9D883 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
U2af1Q9D883 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
U2af1Q9D883 Gm34379-201ENSMUST00000195036 290 ntBASIC14.35□□□□□ -0.11
U2af1Q9D883 Gm18463-201ENSMUST00000207258 474 ntBASIC14.35□□□□□ -0.11
U2af1Q9D883 Gm18460-201ENSMUST00000208088 464 ntBASIC14.35□□□□□ -0.11
U2af1Q9D883 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
U2af1Q9D883 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
U2af1Q9D883 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.35□□□□□ -0.11
U2af1Q9D883 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
U2af1Q9D883 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
U2af1Q9D883 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
U2af1Q9D883 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC14.34□□□□□ -0.11
U2af1Q9D883 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
U2af1Q9D883 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
U2af1Q9D883 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
U2af1Q9D883 Gm38187-201ENSMUST00000195609 4709 ntBASIC14.34□□□□□ -0.11
U2af1Q9D883 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
U2af1Q9D883 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
U2af1Q9D883 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
U2af1Q9D883 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
U2af1Q9D883 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC14.34□□□□□ -0.11
U2af1Q9D883 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
U2af1Q9D883 Gm11628-201ENSMUST00000117568 171 ntBASIC14.34□□□□□ -0.11
U2af1Q9D883 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC14.34□□□□□ -0.11
U2af1Q9D883 Gm5244-201ENSMUST00000164001 339 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms