Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm22982-201ENSMUST00000082613 319 ntBASIC12.11□□□□□ -0.47
Pcdh15Q99PJ1 Gm25125-201ENSMUST00000083340 136 ntBASIC12.11□□□□□ -0.47
Pcdh15Q99PJ1 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh15Q99PJ1 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh15Q99PJ1 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh15Q99PJ1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh15Q99PJ1 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh15Q99PJ1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh15Q99PJ1 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh15Q99PJ1 Dcstamp-205ENSMUST00000228556 1684 ntBASIC12.11□□□□□ -0.47
Pcdh15Q99PJ1 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh15Q99PJ1 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Katnal2-203ENSMUST00000123650 638 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Gm12221-201ENSMUST00000125096 1131 ntBASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Gm12415-201ENSMUST00000141637 512 ntTSL 3 BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Gm9866-201ENSMUST00000177636 486 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Gm18119-201ENSMUST00000219972 616 ntBASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 AC124400.2-201ENSMUST00000224939 253 ntBASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Gm10530-201ENSMUST00000097514 1169 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Gm12904-201ENSMUST00000117451 1399 ntBASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 AC154575.1-201ENSMUST00000227166 1474 ntBASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Gm38348-201ENSMUST00000191718 2273 ntBASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdh15Q99PJ1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Ighv2-2-201ENSMUST00000103443 352 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Olfr281-201ENSMUST00000109163 1058 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Defa-ps16-201ENSMUST00000121939 171 ntBASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Hnf1aos1-202ENSMUST00000129609 516 ntTSL 2 BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Gm7847-201ENSMUST00000151645 777 ntBASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Gm6317-201ENSMUST00000183159 1000 ntBASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Gm10318-201ENSMUST00000186874 930 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Gm18894-201ENSMUST00000198794 694 ntBASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 AC134607.1-201ENSMUST00000214707 485 ntBASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 AC158519.1-201ENSMUST00000228615 179 ntBASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Olfr649-201ENSMUST00000060440 939 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Pcgf5-202ENSMUST00000071267 1508 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Gm27149-201ENSMUST00000184716 1266 ntBASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Spin3-ps-201ENSMUST00000192825 770 ntBASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Gm31784-201ENSMUST00000209523 1053 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Elobl-202ENSMUST00000082339 300 ntBASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdh15Q99PJ1 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms