Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Gm13777-201ENSMUST00000118208 345 ntBASIC13.54□□□□□ -0.24
RtcbQ99LF4 Gm14231-201ENSMUST00000120090 592 ntBASIC13.54□□□□□ -0.24
RtcbQ99LF4 Gm15031-201ENSMUST00000121341 210 ntBASIC13.54□□□□□ -0.24
RtcbQ99LF4 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Gm5190-201ENSMUST00000192434 357 ntBASIC13.54□□□□□ -0.24
RtcbQ99LF4 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC13.54□□□□□ -0.24
RtcbQ99LF4 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RtcbQ99LF4 AC167565.1-201ENSMUST00000226980 1833 ntBASIC13.54□□□□□ -0.24
RtcbQ99LF4 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Gm12716-201ENSMUST00000120606 1354 ntBASIC13.54□□□□□ -0.24
RtcbQ99LF4 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Bcl2-202ENSMUST00000189999 2841 ntBASIC13.53□□□□□ -0.24
RtcbQ99LF4 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC13.53□□□□□ -0.24
RtcbQ99LF4 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Gm37944-201ENSMUST00000194233 414 ntBASIC13.53□□□□□ -0.24
RtcbQ99LF4 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Gm45090-201ENSMUST00000208775 1148 ntBASIC13.53□□□□□ -0.24
RtcbQ99LF4 CT009713.2-201ENSMUST00000225532 1149 ntBASIC13.53□□□□□ -0.24
RtcbQ99LF4 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RtcbQ99LF4 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RtcbQ99LF4 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.53□□□□□ -0.24
RtcbQ99LF4 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RtcbQ99LF4 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.52□□□□□ -0.24
RtcbQ99LF4 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RtcbQ99LF4 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RtcbQ99LF4 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.52□□□□□ -0.24
RtcbQ99LF4 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RtcbQ99LF4 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RtcbQ99LF4 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
RtcbQ99LF4 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RtcbQ99LF4 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RtcbQ99LF4 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RtcbQ99LF4 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RtcbQ99LF4 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RtcbQ99LF4 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
RtcbQ99LF4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RtcbQ99LF4 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Gm28032-201ENSMUST00000184104 96 ntBASIC13.52□□□□□ -0.25
RtcbQ99LF4 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC13.52□□□□□ -0.25
RtcbQ99LF4 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RtcbQ99LF4 Gm8796-201ENSMUST00000219122 936 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms