Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhb18Q91Y02 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Gm24328-201ENSMUST00000175104 67 ntBASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Gm43002-201ENSMUST00000200310 155 ntBASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Gm45135-201ENSMUST00000206787 1184 ntBASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Gm9791-201ENSMUST00000060997 447 ntBASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhb18Q91Y02 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Erich3-203ENSMUST00000189969 3460 ntBASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Gm11475-201ENSMUST00000118482 476 ntBASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Gm15136-201ENSMUST00000120552 533 ntBASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Gm19927-201ENSMUST00000185792 781 ntBASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Trav11n-201ENSMUST00000200113 343 ntBASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Gm45085-201ENSMUST00000209100 441 ntBASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Olfr692-202ENSMUST00000217827 1126 ntBASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Gm6478-201ENSMUST00000099450 742 ntBASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.5□□□□□ -0.57
Pcdhb18Q91Y02 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhb18Q91Y02 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pcdhb18Q91Y02 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Pcdhb18Q91Y02 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Pcdhb18Q91Y02 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms