Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
StrcQ8VIM6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
StrcQ8VIM6 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
StrcQ8VIM6 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
StrcQ8VIM6 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
StrcQ8VIM6 Cdadc1-202ENSMUST00000056997 2202 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
StrcQ8VIM6 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
StrcQ8VIM6 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
StrcQ8VIM6 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC12.7□□□□□ -0.38
StrcQ8VIM6 Gm3532-201ENSMUST00000181880 1396 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
StrcQ8VIM6 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
StrcQ8VIM6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
StrcQ8VIM6 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
StrcQ8VIM6 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
StrcQ8VIM6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
StrcQ8VIM6 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.7□□□□□ -0.38
StrcQ8VIM6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
StrcQ8VIM6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
StrcQ8VIM6 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
StrcQ8VIM6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
StrcQ8VIM6 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Apoo-201ENSMUST00000113895 1173 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Rhox10-201ENSMUST00000115150 763 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Katnal2-203ENSMUST00000123650 638 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Gm11493-201ENSMUST00000134567 566 ntTSL 3 BASIC12.69□□□□□ -0.38
StrcQ8VIM6 4933439K11Rik-202ENSMUST00000140307 941 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Gm11959-201ENSMUST00000148655 723 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Mir6930-201ENSMUST00000183859 68 ntBASIC12.69□□□□□ -0.38
StrcQ8VIM6 Mir6909-201ENSMUST00000184212 62 ntBASIC12.69□□□□□ -0.38
StrcQ8VIM6 Gm8625-201ENSMUST00000194185 1077 ntBASIC12.69□□□□□ -0.38
StrcQ8VIM6 Gm6439-201ENSMUST00000199849 862 ntBASIC12.69□□□□□ -0.38
StrcQ8VIM6 AC124400.2-201ENSMUST00000224939 253 ntBASIC12.69□□□□□ -0.38
StrcQ8VIM6 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.69□□□□□ -0.38
StrcQ8VIM6 Tph1-202ENSMUST00000107669 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Gm15570-201ENSMUST00000122093 625 ntBASIC12.69□□□□□ -0.38
StrcQ8VIM6 Gm13861-201ENSMUST00000137136 495 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC12.69□□□□□ -0.38
StrcQ8VIM6 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC12.69□□□□□ -0.38
StrcQ8VIM6 Gm38132-201ENSMUST00000193358 707 ntTSL 3 BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Gm8083-201ENSMUST00000203976 475 ntBASIC12.69□□□□□ -0.38
StrcQ8VIM6 Eif3k-202ENSMUST00000207683 647 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Gm39481-201ENSMUST00000210379 512 ntBASIC12.69□□□□□ -0.38
StrcQ8VIM6 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC12.69□□□□□ -0.38
StrcQ8VIM6 Gm18165-201ENSMUST00000217426 928 ntBASIC12.69□□□□□ -0.38
StrcQ8VIM6 AC120406.1-201ENSMUST00000220362 482 ntBASIC12.69□□□□□ -0.38
StrcQ8VIM6 Olfr418-201ENSMUST00000059754 991 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Cks2-201ENSMUST00000075853 692 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.69□□□□□ -0.38
StrcQ8VIM6 Gm43362-201ENSMUST00000198192 2470 ntBASIC12.69□□□□□ -0.38
StrcQ8VIM6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Pdgfd-202ENSMUST00000168039 1795 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
StrcQ8VIM6 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
StrcQ8VIM6 Gm19114-201ENSMUST00000193972 1357 ntBASIC12.68□□□□□ -0.38
StrcQ8VIM6 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
StrcQ8VIM6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
StrcQ8VIM6 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC12.68□□□□□ -0.38
StrcQ8VIM6 Gm38348-201ENSMUST00000191718 2273 ntBASIC12.68□□□□□ -0.38
StrcQ8VIM6 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
StrcQ8VIM6 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
StrcQ8VIM6 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
StrcQ8VIM6 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC12.68□□□□□ -0.38
StrcQ8VIM6 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.68□□□□□ -0.38
StrcQ8VIM6 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
StrcQ8VIM6 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.68□□□□□ -0.38
StrcQ8VIM6 Olfr281-201ENSMUST00000109163 1058 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
StrcQ8VIM6 Gm11652-201ENSMUST00000117842 1267 ntBASIC12.68□□□□□ -0.38
StrcQ8VIM6 Dcdc5-203ENSMUST00000126340 396 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
StrcQ8VIM6 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
StrcQ8VIM6 Gm6773-201ENSMUST00000182377 878 ntBASIC12.68□□□□□ -0.38
StrcQ8VIM6 Gm18857-201ENSMUST00000210421 901 ntBASIC12.68□□□□□ -0.38
StrcQ8VIM6 AC140393.4-201ENSMUST00000226994 765 ntBASIC12.68□□□□□ -0.38
StrcQ8VIM6 AC170810.2-201ENSMUST00000228384 1232 ntBASIC12.68□□□□□ -0.38
StrcQ8VIM6 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.68□□□□□ -0.38
StrcQ8VIM6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
StrcQ8VIM6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
StrcQ8VIM6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
StrcQ8VIM6 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
StrcQ8VIM6 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms