Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm13384-201ENSMUST00000117166 1344 ntBASIC10.33□□□□□ -0.76
Clrn1Q8K445 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.33□□□□□ -0.76
Clrn1Q8K445 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm11573-201ENSMUST00000119956 394 ntBASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm25343-201ENSMUST00000157460 107 ntBASIC10.33□□□□□ -0.76
Clrn1Q8K445 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.33□□□□□ -0.76
Clrn1Q8K445 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Clrn1Q8K445 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm28032-201ENSMUST00000184104 96 ntBASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm42816-201ENSMUST00000198433 325 ntBASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm5051-201ENSMUST00000204085 485 ntBASIC10.33□□□□□ -0.76
Clrn1Q8K445 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC10.33□□□□□ -0.76
Clrn1Q8K445 AC102368.1-201ENSMUST00000227161 892 ntBASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm25580-201ENSMUST00000083409 327 ntBASIC10.33□□□□□ -0.76
Clrn1Q8K445 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.33□□□□□ -0.76
Clrn1Q8K445 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Clrn1Q8K445 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.32□□□□□ -0.76
Clrn1Q8K445 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.32□□□□□ -0.76
Clrn1Q8K445 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC10.32□□□□□ -0.76
Clrn1Q8K445 Gm12663-201ENSMUST00000118481 958 ntBASIC10.32□□□□□ -0.76
Clrn1Q8K445 Gm11667-201ENSMUST00000119828 486 ntBASIC10.32□□□□□ -0.76
Clrn1Q8K445 Gm13182-201ENSMUST00000122241 312 ntBASIC10.32□□□□□ -0.76
Clrn1Q8K445 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Gm22138-201ENSMUST00000158748 128 ntBASIC10.32□□□□□ -0.76
Clrn1Q8K445 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Clrn1Q8K445 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms