Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Gm25076-201ENSMUST00000104098 132 ntBASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Gm13284-201ENSMUST00000121020 547 ntBASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Gm5599-201ENSMUST00000209602 788 ntBASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 AA474408-201ENSMUST00000098110 3339 ntBASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Gm7742-201ENSMUST00000167648 1527 ntBASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Gm7732-201ENSMUST00000170486 1527 ntBASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Gm7740-201ENSMUST00000186171 1527 ntBASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Gm7736-201ENSMUST00000096981 1527 ntBASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Gm45675-201ENSMUST00000211202 3429 ntBASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Gm15264-201ENSMUST00000118050 502 ntBASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Gm28624-201ENSMUST00000186430 2131 ntBASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Gm37852-201ENSMUST00000193027 350 ntBASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cchcr1Q8K2I2 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cchcr1Q8K2I2 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cchcr1Q8K2I2 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cchcr1Q8K2I2 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cchcr1Q8K2I2 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cchcr1Q8K2I2 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cchcr1Q8K2I2 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cchcr1Q8K2I2 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cchcr1Q8K2I2 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cchcr1Q8K2I2 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cchcr1Q8K2I2 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cchcr1Q8K2I2 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cchcr1Q8K2I2 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.92□□□□□ -0.34
Cchcr1Q8K2I2 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.92□□□□□ -0.34
Cchcr1Q8K2I2 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 1759.8 ms