Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc90bQ8C3X2 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.53□□□□□ -0.72
Ccdc90bQ8C3X2 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.53□□□□□ -0.72
Ccdc90bQ8C3X2 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Ccdc90bQ8C3X2 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc90bQ8C3X2 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Ccdc90bQ8C3X2 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc90bQ8C3X2 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc90bQ8C3X2 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc90bQ8C3X2 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Ccdc90bQ8C3X2 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc90bQ8C3X2 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc90bQ8C3X2 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ccdc90bQ8C3X2 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC10.52□□□□□ -0.72
Ccdc90bQ8C3X2 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ccdc90bQ8C3X2 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Ccdc90bQ8C3X2 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Ccdc90bQ8C3X2 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Ccdc90bQ8C3X2 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.72
Ccdc90bQ8C3X2 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ccdc90bQ8C3X2 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Fbxo38-201ENSMUST00000048688 4388 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gm14592-201ENSMUST00000117201 560 ntBASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gm12742-201ENSMUST00000117326 410 ntBASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gm15264-201ENSMUST00000118050 502 ntBASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gm18734-201ENSMUST00000172937 808 ntBASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gm45433-201ENSMUST00000209386 247 ntBASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gm31941-201ENSMUST00000209689 350 ntBASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 AC137950.2-201ENSMUST00000227127 1089 ntBASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gm10288-201ENSMUST00000084614 537 ntBASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 AC144938.1-201ENSMUST00000223994 2167 ntBASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gm8320-201ENSMUST00000177584 1762 ntBASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gm8303-201ENSMUST00000178371 1762 ntBASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gm8331-201ENSMUST00000178433 1762 ntBASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccdc90bQ8C3X2 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc90bQ8C3X2 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc90bQ8C3X2 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC10.51□□□□□ -0.73
Ccdc90bQ8C3X2 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc90bQ8C3X2 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc90bQ8C3X2 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc90bQ8C3X2 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc90bQ8C3X2 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Ccdc90bQ8C3X2 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc90bQ8C3X2 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Ccdc90bQ8C3X2 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc90bQ8C3X2 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc90bQ8C3X2 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc90bQ8C3X2 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc90bQ8C3X2 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccdc90bQ8C3X2 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Ccdc90bQ8C3X2 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.51□□□□□ -0.73
Ccdc90bQ8C3X2 Gm14724-201ENSMUST00000118400 537 ntBASIC10.51□□□□□ -0.73
Ccdc90bQ8C3X2 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.51□□□□□ -0.73
Ccdc90bQ8C3X2 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms