Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Usp44Q8C2S0 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.79□□□□□ -0.36
Usp44Q8C2S0 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp44Q8C2S0 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp44Q8C2S0 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp44Q8C2S0 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp44Q8C2S0 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp44Q8C2S0 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Usp44Q8C2S0 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp44Q8C2S0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Usp44Q8C2S0 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp44Q8C2S0 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.79□□□□□ -0.36
Usp44Q8C2S0 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp44Q8C2S0 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Gm25053-201ENSMUST00000103982 133 ntBASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Gm25922-201ENSMUST00000104281 130 ntBASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Gm24679-201ENSMUST00000158762 111 ntBASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Gm25053-202ENSMUST00000199731 132 ntBASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 AC154528.2-201ENSMUST00000228432 3023 ntBASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Gm45124-201ENSMUST00000206723 2755 ntBASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp44Q8C2S0 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Usp44Q8C2S0 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp44Q8C2S0 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp44Q8C2S0 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Usp44Q8C2S0 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC12.77□□□□□ -0.36
Usp44Q8C2S0 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.77□□□□□ -0.36
Usp44Q8C2S0 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp44Q8C2S0 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp44Q8C2S0 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Usp44Q8C2S0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Usp44Q8C2S0 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Gm16518-201ENSMUST00000117960 508 ntBASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Mir1905-201ENSMUST00000122779 82 ntBASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Mir7035-201ENSMUST00000184713 82 ntBASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Gm20781-201ENSMUST00000193154 693 ntBASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Gm21736-201ENSMUST00000195399 693 ntBASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Gm32111-201ENSMUST00000207689 846 ntBASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp44Q8C2S0 AC154220.1-201ENSMUST00000225033 1705 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 113.5 ms