Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Ighv13-1-201ENSMUST00000103480 294 ntBASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Gm24312-201ENSMUST00000178677 119 ntBASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Gm27440-201ENSMUST00000184785 107 ntBASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Gm6855-201ENSMUST00000206307 790 ntBASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 AC140375.1-201ENSMUST00000225421 694 ntBASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sh3rf2Q8BZT2 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Gm12943-201ENSMUST00000119616 210 ntBASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Gm12745-201ENSMUST00000121767 214 ntBASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Gm25569-201ENSMUST00000157175 131 ntBASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Gm16547-201ENSMUST00000159474 293 ntBASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Gm28032-201ENSMUST00000184104 96 ntBASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Gm5449-201ENSMUST00000081132 357 ntBASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sh3rf2Q8BZT2 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sh3rf2Q8BZT2 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms