Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Gm28746-201ENSMUST00000187453 380 ntBASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Gm5700-201ENSMUST00000191483 989 ntBASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Gm6423-201ENSMUST00000204315 934 ntBASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Gm45258-201ENSMUST00000210042 853 ntBASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Gm4604-201ENSMUST00000025040 390 ntBASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Gm25125-201ENSMUST00000083340 136 ntBASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vps54Q5SPW0 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Ighv13-1-201ENSMUST00000103480 294 ntBASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Gm11619-201ENSMUST00000117474 237 ntBASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Gm13022-201ENSMUST00000121181 285 ntBASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Gm19918-201ENSMUST00000194858 400 ntBASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Gm43097-201ENSMUST00000196867 151 ntBASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vps54Q5SPW0 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Gm7047-201ENSMUST00000196224 1063 ntBASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Vps54Q5SPW0 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms