Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Spata33-207ENSMUST00000212760 4074 ntBASIC8.51□□□□□ -1.05
Cdx4Q07424 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC8.51□□□□□ -1.05
Cdx4Q07424 Gm25076-201ENSMUST00000104098 132 ntBASIC8.51□□□□□ -1.05
Cdx4Q07424 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Cdx4Q07424 Gm11628-201ENSMUST00000117568 171 ntBASIC8.51□□□□□ -1.05
Cdx4Q07424 Gm15615-201ENSMUST00000118876 198 ntBASIC8.51□□□□□ -1.05
Cdx4Q07424 Gm11244-201ENSMUST00000121243 237 ntBASIC8.51□□□□□ -1.05
Cdx4Q07424 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC8.51□□□□□ -1.05
Cdx4Q07424 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC8.51□□□□□ -1.05
Cdx4Q07424 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC8.51□□□□□ -1.05
Cdx4Q07424 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
Cdx4Q07424 Gm24398-201ENSMUST00000157870 109 ntBASIC8.51□□□□□ -1.05
Cdx4Q07424 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC8.51□□□□□ -1.05
Cdx4Q07424 Mir8115-201ENSMUST00000184992 119 ntBASIC8.51□□□□□ -1.05
Cdx4Q07424 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC8.51□□□□□ -1.05
Cdx4Q07424 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC8.51□□□□□ -1.05
Cdx4Q07424 AC160929.1-201ENSMUST00000221247 415 ntBASIC8.51□□□□□ -1.05
Cdx4Q07424 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
Cdx4Q07424 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC8.51□□□□□ -1.05
Cdx4Q07424 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 AC166359.1-201ENSMUST00000220243 1871 ntBASIC8.51□□□□□ -1.05
Cdx4Q07424 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 AC165351.1-201ENSMUST00000219078 2020 ntBASIC8.51□□□□□ -1.05
Cdx4Q07424 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC8.51□□□□□ -1.05
Cdx4Q07424 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Cdx4Q07424 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Cdx4Q07424 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC8.51□□□□□ -1.05
Cdx4Q07424 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Gm37954-201ENSMUST00000195400 2071 ntBASIC8.5□□□□□ -1.05
Cdx4Q07424 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC8.5□□□□□ -1.05
Cdx4Q07424 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Cdx4Q07424 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
Cdx4Q07424 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Cdx4Q07424 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Cdx4Q07424 Gm4294-201ENSMUST00000105169 614 ntBASIC8.5□□□□□ -1.05
Cdx4Q07424 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Cdx4Q07424 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Cdx4Q07424 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Cdx4Q07424 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Cdx4Q07424 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Cdx4Q07424 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Cdx4Q07424 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Mir6998-201ENSMUST00000183343 64 ntBASIC8.5□□□□□ -1.05
Cdx4Q07424 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC8.5□□□□□ -1.05
Cdx4Q07424 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Gm8574-201ENSMUST00000203207 924 ntBASIC8.5□□□□□ -1.05
Cdx4Q07424 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Gm5996-201ENSMUST00000211110 718 ntBASIC8.5□□□□□ -1.05
Cdx4Q07424 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Cdx4Q07424 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC8.5□□□□□ -1.05
Cdx4Q07424 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Cdx4Q07424 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Cdx4Q07424 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms