Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Smn1P97801 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smn1P97801 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Smn1P97801 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.35□□□□□ -0.91
Smn1P97801 Gm42859-201ENSMUST00000199572 193 ntBASIC9.35□□□□□ -0.91
Smn1P97801 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Gm7783-201ENSMUST00000204795 781 ntBASIC9.35□□□□□ -0.91
Smn1P97801 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Gm18730-201ENSMUST00000218038 343 ntBASIC9.35□□□□□ -0.91
Smn1P97801 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smn1P97801 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC9.35□□□□□ -0.91
Smn1P97801 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Smn1P97801 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Gm8385-201ENSMUST00000058999 643 ntBASIC9.35□□□□□ -0.91
Smn1P97801 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Smn1P97801 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Smn1P97801 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Smn1P97801 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smn1P97801 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC9.35□□□□□ -0.91
Smn1P97801 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.35□□□□□ -0.91
Smn1P97801 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC9.35□□□□□ -0.91
Smn1P97801 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.35□□□□□ -0.91
Smn1P97801 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smn1P97801 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.35□□□□□ -0.91
Smn1P97801 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Smn1P97801 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smn1P97801 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC9.34□□□□□ -0.91
Smn1P97801 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smn1P97801 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smn1P97801 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC9.34□□□□□ -0.91
Smn1P97801 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC9.34□□□□□ -0.91
Smn1P97801 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC9.34□□□□□ -0.91
Smn1P97801 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC9.34□□□□□ -0.91
Smn1P97801 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Smn1P97801 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Smn1P97801 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Smn1P97801 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Smn1P97801 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Smn1P97801 Gm23694-201ENSMUST00000179335 110 ntBASIC9.34□□□□□ -0.91
Smn1P97801 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC9.34□□□□□ -0.91
Smn1P97801 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC9.34□□□□□ -0.91
Smn1P97801 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC9.34□□□□□ -0.91
Smn1P97801 Gm18515-201ENSMUST00000219755 797 ntBASIC9.34□□□□□ -0.91
Smn1P97801 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.34□□□□□ -0.91
Smn1P97801 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Smn1P97801 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Gm25125-201ENSMUST00000083340 136 ntBASIC9.34□□□□□ -0.91
Smn1P97801 Gm21811-201ENSMUST00000096485 930 ntBASIC9.34□□□□□ -0.91
Smn1P97801 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC9.34□□□□□ -0.91
Smn1P97801 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Smn1P97801 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smn1P97801 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smn1P97801 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Smn1P97801 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Smn1P97801 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smn1P97801 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smn1P97801 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC9.33□□□□□ -0.92
Smn1P97801 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smn1P97801 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC9.33□□□□□ -0.92
Smn1P97801 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Smn1P97801 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Smn1P97801 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms