Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Lig3P97386 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.06□□□□□ -0.48
Lig3P97386 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.06□□□□□ -0.48
Lig3P97386 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.06□□□□□ -0.48
Lig3P97386 Gm45113-201ENSMUST00000207518 165 ntBASIC12.06□□□□□ -0.48
Lig3P97386 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.06□□□□□ -0.48
Lig3P97386 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Lig3P97386 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Lig3P97386 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.06□□□□□ -0.48
Lig3P97386 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.06□□□□□ -0.48
Lig3P97386 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.06□□□□□ -0.48
Lig3P97386 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Lig3P97386 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Lig3P97386 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lig3P97386 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Lig3P97386 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.05□□□□□ -0.48
Lig3P97386 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.05□□□□□ -0.48
Lig3P97386 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Gm37826-201ENSMUST00000195329 322 ntBASIC12.05□□□□□ -0.48
Lig3P97386 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.05□□□□□ -0.48
Lig3P97386 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Gm5513-201ENSMUST00000072982 1218 ntBASIC12.05□□□□□ -0.48
Lig3P97386 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Lig3P97386 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lig3P97386 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Lig3P97386 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lig3P97386 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lig3P97386 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lig3P97386 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lig3P97386 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.05□□□□□ -0.48
Lig3P97386 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lig3P97386 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Lig3P97386 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lig3P97386 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lig3P97386 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lig3P97386 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lig3P97386 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lig3P97386 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.04□□□□□ -0.48
Lig3P97386 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lig3P97386 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lig3P97386 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lig3P97386 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.04□□□□□ -0.48
Lig3P97386 Gm25998-201ENSMUST00000175397 53 ntBASIC12.04□□□□□ -0.48
Lig3P97386 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms