Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 AC165092.1-201ENSMUST00000224018 486 ntBASIC11.28□□□□□ -0.6
Cxcl12P40224 AC139155.1-201ENSMUST00000226043 444 ntBASIC11.28□□□□□ -0.6
Cxcl12P40224 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Cxcl12P40224 Gm10617-201ENSMUST00000098368 1172 ntBASIC11.28□□□□□ -0.6
Cxcl12P40224 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.28□□□□□ -0.6
Cxcl12P40224 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cxcl12P40224 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Cxcl12P40224 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Gm12716-201ENSMUST00000120606 1354 ntBASIC11.28□□□□□ -0.6
Cxcl12P40224 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcl12P40224 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cxcl12P40224 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cxcl12P40224 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC11.27□□□□□ -0.6
Cxcl12P40224 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cxcl12P40224 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.27□□□□□ -0.6
Cxcl12P40224 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cxcl12P40224 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.27□□□□□ -0.61
Cxcl12P40224 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl12P40224 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl12P40224 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl12P40224 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cxcl12P40224 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cxcl12P40224 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.27□□□□□ -0.61
Cxcl12P40224 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl12P40224 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl12P40224 Gm3635-201ENSMUST00000212314 354 ntBASIC11.27□□□□□ -0.61
Cxcl12P40224 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC11.27□□□□□ -0.61
Cxcl12P40224 AC130217.1-201ENSMUST00000224146 909 ntBASIC11.27□□□□□ -0.61
Cxcl12P40224 AC134860.2-201ENSMUST00000225277 1036 ntBASIC11.27□□□□□ -0.61
Cxcl12P40224 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cxcl12P40224 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl12P40224 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl12P40224 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl12P40224 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cxcl12P40224 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cxcl12P40224 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cxcl12P40224 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl12P40224 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl12P40224 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl12P40224 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.27□□□□□ -0.61
Cxcl12P40224 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl12P40224 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl12P40224 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl12P40224 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl12P40224 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcl12P40224 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cxcl12P40224 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Erich3-203ENSMUST00000189969 3460 ntBASIC11.26□□□□□ -0.61
Cxcl12P40224 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Gm7781-201ENSMUST00000117258 788 ntBASIC11.26□□□□□ -0.61
Cxcl12P40224 Gm13215-201ENSMUST00000117559 472 ntBASIC11.26□□□□□ -0.61
Cxcl12P40224 Gm12047-201ENSMUST00000117561 944 ntBASIC11.26□□□□□ -0.61
Cxcl12P40224 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.26□□□□□ -0.61
Cxcl12P40224 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Gm26532-201ENSMUST00000180630 690 ntBASIC11.26□□□□□ -0.61
Cxcl12P40224 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Gm6008-201ENSMUST00000206542 874 ntBASIC11.26□□□□□ -0.61
Cxcl12P40224 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Cxcl12P40224 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcl12P40224 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms