Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ccl1P10146 Csf2rb2-201ENSMUST00000096356 4612 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ccl1P10146 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
Ccl1P10146 Lrrk2-201ENSMUST00000060642 8275 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ccl1P10146 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ccl1P10146 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ccl1P10146 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ccl1P10146 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC8.4□□□□□ -1.06
Ccl1P10146 Stx8-201ENSMUST00000021285 4394 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Cemip-201ENSMUST00000064174 7111 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC8.4□□□□□ -1.06
Ccl1P10146 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC8.4□□□□□ -1.06
Ccl1P10146 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC8.4□□□□□ -1.06
Ccl1P10146 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Ccl1P10146 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC8.4□□□□□ -1.06
Ccl1P10146 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Gm15370-201ENSMUST00000117158 253 ntBASIC8.4□□□□□ -1.06
Ccl1P10146 Gm11509-201ENSMUST00000117358 325 ntBASIC8.4□□□□□ -1.06
Ccl1P10146 Gm15264-201ENSMUST00000118050 502 ntBASIC8.4□□□□□ -1.06
Ccl1P10146 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC8.4□□□□□ -1.06
Ccl1P10146 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC8.4□□□□□ -1.06
Ccl1P10146 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC8.4□□□□□ -1.06
Ccl1P10146 Gm10807-201ENSMUST00000177134 795 ntBASIC8.4□□□□□ -1.06
Ccl1P10146 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC8.4□□□□□ -1.06
Ccl1P10146 Gm27046-201ENSMUST00000182160 463 ntBASIC8.4□□□□□ -1.06
Ccl1P10146 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC8.4□□□□□ -1.06
Ccl1P10146 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC8.4□□□□□ -1.06
Ccl1P10146 Gm45784-201ENSMUST00000188360 142 ntBASIC8.4□□□□□ -1.06
Ccl1P10146 Gm31256-201ENSMUST00000194705 506 ntBASIC8.4□□□□□ -1.06
Ccl1P10146 Gm38151-201ENSMUST00000195085 289 ntBASIC8.4□□□□□ -1.06
Ccl1P10146 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC8.4□□□□□ -1.06
Ccl1P10146 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Gm17827-201ENSMUST00000211825 742 ntBASIC8.4□□□□□ -1.06
Ccl1P10146 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC8.4□□□□□ -1.06
Ccl1P10146 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC8.4□□□□□ -1.06
Ccl1P10146 Gm19208-201ENSMUST00000213861 912 ntBASIC8.4□□□□□ -1.06
Ccl1P10146 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC8.4□□□□□ -1.06
Ccl1P10146 AC154436.1-201ENSMUST00000227272 782 ntBASIC8.4□□□□□ -1.06
Ccl1P10146 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC8.4□□□□□ -1.06
Ccl1P10146 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Ccl1P10146 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Ccl1P10146 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Ccl1P10146 Gm6768-201ENSMUST00000022467 1878 ntBASIC8.4□□□□□ -1.07
Ccl1P10146 Phf21a-204ENSMUST00000111290 6332 ntTSL 5 BASIC8.4□□□□□ -1.07
Ccl1P10146 Phf21a-203ENSMUST00000090586 6310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ccl1P10146 Ammecr1l-201ENSMUST00000115808 4769 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ccl1P10146 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ccl1P10146 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ccl1P10146 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ccl1P10146 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ccl1P10146 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC8.4□□□□□ -1.07
Ccl1P10146 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
Ccl1P10146 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Ccl1P10146 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ccl1P10146 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Ccl1P10146 Bcl9-207ENSMUST00000166341 4652 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccl1P10146 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC8.39□□□□□ -1.07
Ccl1P10146 Cdh18-207ENSMUST00000226693 2165 ntBASIC8.39□□□□□ -1.07
Ccl1P10146 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccl1P10146 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ccl1P10146 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccl1P10146 Rasgrp4-202ENSMUST00000094617 4617 ntTSL 5 BASIC8.39□□□□□ -1.07
Ccl1P10146 Gm9072-201ENSMUST00000218390 1514 ntBASIC8.39□□□□□ -1.07
Ccl1P10146 Tulp4-209ENSMUST00000149756 8784 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ccl1P10146 Thsd7b-201ENSMUST00000040311 3895 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Ccl1P10146 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC8.39□□□□□ -1.07
Ccl1P10146 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccl1P10146 Gm43143-201ENSMUST00000196083 2023 ntBASIC8.39□□□□□ -1.07
Ccl1P10146 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
Ccl1P10146 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccl1P10146 AC121574.1-201ENSMUST00000228770 3132 ntBASIC8.39□□□□□ -1.07
Ccl1P10146 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccl1P10146 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccl1P10146 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Ccl1P10146 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccl1P10146 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccl1P10146 Zbtb43-201ENSMUST00000028125 4998 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccl1P10146 Fadd-201ENSMUST00000033394 3903 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Ccl1P10146 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms