Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC12.27□□□□□ -0.45
B020004C17RikJ3QP07 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
B020004C17RikJ3QP07 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
B020004C17RikJ3QP07 Rgr-203ENSMUST00000225070 4704 ntBASIC12.27□□□□□ -0.45
B020004C17RikJ3QP07 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
B020004C17RikJ3QP07 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
B020004C17RikJ3QP07 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
B020004C17RikJ3QP07 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
B020004C17RikJ3QP07 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
B020004C17RikJ3QP07 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Gm13281-201ENSMUST00000120871 567 ntBASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Gm5801-201ENSMUST00000182247 780 ntBASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Gm29808-201ENSMUST00000194419 468 ntBASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Gm42687-201ENSMUST00000199075 164 ntBASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Gm42710-201ENSMUST00000200608 985 ntBASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Gm44540-201ENSMUST00000205640 354 ntBASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Gm45310-201ENSMUST00000210436 275 ntBASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Gm8796-201ENSMUST00000219122 936 ntBASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 AC102523.1-201ENSMUST00000228706 1144 ntBASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Gm8730-201ENSMUST00000076373 954 ntBASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Gm37264-201ENSMUST00000194916 2192 ntBASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
B020004C17RikJ3QP07 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Gm43636-201ENSMUST00000201501 2235 ntBASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Gm14639-201ENSMUST00000120850 866 ntBASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Gm11736-201ENSMUST00000121468 505 ntBASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Gm6939-201ENSMUST00000122029 864 ntBASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Gm14148-201ENSMUST00000122433 1008 ntBASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Gm4775-201ENSMUST00000169588 402 ntBASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Gm22662-201ENSMUST00000175290 256 ntBASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Gm22876-201ENSMUST00000175450 298 ntBASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Gm18164-201ENSMUST00000213769 927 ntBASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Gm18166-201ENSMUST00000215557 927 ntBASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
B020004C17RikJ3QP07 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms