Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Gm32072-201ENSMUST00000200803 1434 ntBASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Gm5432-201ENSMUST00000180759 1670 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ccdc188F6WEU2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Gm19001-201ENSMUST00000222736 1651 ntBASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Rpsa-ps11-201ENSMUST00000118446 889 ntBASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Gm15031-201ENSMUST00000121341 210 ntBASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Elof1-201ENSMUST00000013966 888 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Gm21917-203ENSMUST00000180309 561 ntTSL 3 BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Gm20281-201ENSMUST00000188225 267 ntBASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Gm29485-201ENSMUST00000190220 282 ntBASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Gm42917-201ENSMUST00000200668 928 ntTSL 3 BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 1700102F20Rik-201ENSMUST00000203859 670 ntBASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Gm7210-201ENSMUST00000209309 1067 ntBASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Gm8557-201ENSMUST00000220777 475 ntBASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Gm6721-201ENSMUST00000218353 1445 ntBASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Serpina5-201ENSMUST00000021495 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc188F6WEU2 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Gm14407-201ENSMUST00000121260 447 ntBASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Gm6286-201ENSMUST00000145247 762 ntBASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Gm26639-201ENSMUST00000181426 491 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Gm27953-201ENSMUST00000185171 143 ntBASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Gm28179-201ENSMUST00000188365 613 ntBASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Ighv5-10-201ENSMUST00000194591 252 ntBASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Gm43097-201ENSMUST00000196867 151 ntBASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Gm42467-201ENSMUST00000202954 1447 ntBASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Gm42067-202ENSMUST00000210917 410 ntTSL 2 BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Gm30619-201ENSMUST00000213962 686 ntBASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Olfr371-202ENSMUST00000218663 1162 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Ccdc188F6WEU2 Gm40723-201ENSMUST00000219407 603 ntTSL 3 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms