Protein–RNA interactions for Protein: Q9WV55

Vapa, Vesicle-associated membrane protein-associated protein A, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VapaQ9WV55 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VapaQ9WV55 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.23■□□□□ 0.67
VapaQ9WV55 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VapaQ9WV55 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VapaQ9WV55 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VapaQ9WV55 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VapaQ9WV55 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
VapaQ9WV55 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.22■□□□□ 0.67
VapaQ9WV55 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VapaQ9WV55 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
VapaQ9WV55 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VapaQ9WV55 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VapaQ9WV55 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VapaQ9WV55 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.21■□□□□ 0.67
VapaQ9WV55 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.21■□□□□ 0.67
VapaQ9WV55 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VapaQ9WV55 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VapaQ9WV55 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
VapaQ9WV55 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VapaQ9WV55 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VapaQ9WV55 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
VapaQ9WV55 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VapaQ9WV55 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
VapaQ9WV55 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VapaQ9WV55 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
VapaQ9WV55 Gm10232-201ENSMUST00000089221 720 ntBASIC19.2■□□□□ 0.66
VapaQ9WV55 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
VapaQ9WV55 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VapaQ9WV55 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
VapaQ9WV55 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VapaQ9WV55 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VapaQ9WV55 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VapaQ9WV55 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VapaQ9WV55 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VapaQ9WV55 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VapaQ9WV55 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.18■□□□□ 0.66
VapaQ9WV55 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.18■□□□□ 0.66
VapaQ9WV55 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VapaQ9WV55 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.18■□□□□ 0.66
VapaQ9WV55 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VapaQ9WV55 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VapaQ9WV55 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VapaQ9WV55 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VapaQ9WV55 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VapaQ9WV55 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.17■□□□□ 0.66
VapaQ9WV55 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.17■□□□□ 0.66
VapaQ9WV55 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VapaQ9WV55 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VapaQ9WV55 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.17■□□□□ 0.66
VapaQ9WV55 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.17■□□□□ 0.66
VapaQ9WV55 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VapaQ9WV55 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VapaQ9WV55 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.17■□□□□ 0.66
VapaQ9WV55 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VapaQ9WV55 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VapaQ9WV55 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VapaQ9WV55 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VapaQ9WV55 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
VapaQ9WV55 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VapaQ9WV55 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.16■□□□□ 0.66
VapaQ9WV55 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
VapaQ9WV55 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VapaQ9WV55 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
VapaQ9WV55 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VapaQ9WV55 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.15■□□□□ 0.66
VapaQ9WV55 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
VapaQ9WV55 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.15■□□□□ 0.66
VapaQ9WV55 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.15■□□□□ 0.66
VapaQ9WV55 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
VapaQ9WV55 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VapaQ9WV55 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.15■□□□□ 0.66
VapaQ9WV55 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.14■□□□□ 0.66
VapaQ9WV55 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
VapaQ9WV55 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.14■□□□□ 0.65
VapaQ9WV55 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
VapaQ9WV55 Gm7143-201ENSMUST00000222811 859 ntBASIC19.14■□□□□ 0.65
VapaQ9WV55 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VapaQ9WV55 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VapaQ9WV55 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VapaQ9WV55 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
VapaQ9WV55 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
VapaQ9WV55 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
VapaQ9WV55 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
VapaQ9WV55 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
VapaQ9WV55 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
VapaQ9WV55 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
VapaQ9WV55 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
VapaQ9WV55 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VapaQ9WV55 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
VapaQ9WV55 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
VapaQ9WV55 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VapaQ9WV55 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VapaQ9WV55 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VapaQ9WV55 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VapaQ9WV55 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
VapaQ9WV55 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VapaQ9WV55 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VapaQ9WV55 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VapaQ9WV55 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
VapaQ9WV55 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms