Protein–RNA interactions for Protein: Q9WTV7

Rlim, E3 ubiquitin-protein ligase RLIM, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RlimQ9WTV7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.3■□□□□ 0.52
RlimQ9WTV7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RlimQ9WTV7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RlimQ9WTV7 Gm7143-201ENSMUST00000222811 859 ntBASIC18.29■□□□□ 0.52
RlimQ9WTV7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RlimQ9WTV7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RlimQ9WTV7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RlimQ9WTV7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RlimQ9WTV7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RlimQ9WTV7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RlimQ9WTV7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
RlimQ9WTV7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RlimQ9WTV7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RlimQ9WTV7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RlimQ9WTV7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RlimQ9WTV7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RlimQ9WTV7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.28■□□□□ 0.52
RlimQ9WTV7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RlimQ9WTV7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RlimQ9WTV7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RlimQ9WTV7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RlimQ9WTV7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RlimQ9WTV7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RlimQ9WTV7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.27■□□□□ 0.52
RlimQ9WTV7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RlimQ9WTV7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RlimQ9WTV7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.27■□□□□ 0.52
RlimQ9WTV7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RlimQ9WTV7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RlimQ9WTV7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.27■□□□□ 0.52
RlimQ9WTV7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RlimQ9WTV7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RlimQ9WTV7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RlimQ9WTV7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RlimQ9WTV7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RlimQ9WTV7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RlimQ9WTV7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.26■□□□□ 0.51
RlimQ9WTV7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RlimQ9WTV7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RlimQ9WTV7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RlimQ9WTV7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
RlimQ9WTV7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RlimQ9WTV7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RlimQ9WTV7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.25■□□□□ 0.51
RlimQ9WTV7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RlimQ9WTV7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RlimQ9WTV7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RlimQ9WTV7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RlimQ9WTV7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RlimQ9WTV7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RlimQ9WTV7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RlimQ9WTV7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RlimQ9WTV7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RlimQ9WTV7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RlimQ9WTV7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RlimQ9WTV7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RlimQ9WTV7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RlimQ9WTV7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RlimQ9WTV7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
RlimQ9WTV7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RlimQ9WTV7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.23■□□□□ 0.51
RlimQ9WTV7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RlimQ9WTV7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RlimQ9WTV7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RlimQ9WTV7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RlimQ9WTV7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RlimQ9WTV7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RlimQ9WTV7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.23■□□□□ 0.51
RlimQ9WTV7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RlimQ9WTV7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RlimQ9WTV7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RlimQ9WTV7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RlimQ9WTV7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
RlimQ9WTV7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RlimQ9WTV7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RlimQ9WTV7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RlimQ9WTV7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RlimQ9WTV7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RlimQ9WTV7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.22■□□□□ 0.51
RlimQ9WTV7 Gm15820-201ENSMUST00000201566 728 ntBASIC18.22■□□□□ 0.51
RlimQ9WTV7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RlimQ9WTV7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RlimQ9WTV7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RlimQ9WTV7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RlimQ9WTV7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.22■□□□□ 0.51
RlimQ9WTV7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.22■□□□□ 0.51
RlimQ9WTV7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RlimQ9WTV7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RlimQ9WTV7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.21■□□□□ 0.51
RlimQ9WTV7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RlimQ9WTV7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RlimQ9WTV7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RlimQ9WTV7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RlimQ9WTV7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RlimQ9WTV7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RlimQ9WTV7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RlimQ9WTV7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RlimQ9WTV7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RlimQ9WTV7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RlimQ9WTV7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms