Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.77■□□□□ 0.76
Rrp8Q9DB85 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.77■□□□□ 0.76
Rrp8Q9DB85 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rrp8Q9DB85 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rrp8Q9DB85 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rrp8Q9DB85 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rrp8Q9DB85 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rrp8Q9DB85 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp8Q9DB85 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp8Q9DB85 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp8Q9DB85 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp8Q9DB85 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp8Q9DB85 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp8Q9DB85 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rrp8Q9DB85 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp8Q9DB85 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.76■□□□□ 0.75
Rrp8Q9DB85 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp8Q9DB85 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rrp8Q9DB85 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp8Q9DB85 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp8Q9DB85 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp8Q9DB85 AV356131-201ENSMUST00000206201 750 ntBASIC19.75■□□□□ 0.75
Rrp8Q9DB85 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp8Q9DB85 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp8Q9DB85 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rrp8Q9DB85 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rrp8Q9DB85 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rrp8Q9DB85 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rrp8Q9DB85 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rrp8Q9DB85 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rrp8Q9DB85 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rrp8Q9DB85 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Rrp8Q9DB85 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rrp8Q9DB85 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rrp8Q9DB85 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rrp8Q9DB85 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rrp8Q9DB85 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rrp8Q9DB85 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rrp8Q9DB85 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rrp8Q9DB85 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rrp8Q9DB85 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rrp8Q9DB85 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rrp8Q9DB85 Gm10033-202ENSMUST00000211874 928 ntBASIC19.73■□□□□ 0.75
Rrp8Q9DB85 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rrp8Q9DB85 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rrp8Q9DB85 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rrp8Q9DB85 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.72■□□□□ 0.75
Rrp8Q9DB85 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.72■□□□□ 0.75
Rrp8Q9DB85 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.72■□□□□ 0.75
Rrp8Q9DB85 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rrp8Q9DB85 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rrp8Q9DB85 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.72■□□□□ 0.75
Rrp8Q9DB85 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.72■□□□□ 0.75
Rrp8Q9DB85 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rrp8Q9DB85 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rrp8Q9DB85 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.72■□□□□ 0.75
Rrp8Q9DB85 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rrp8Q9DB85 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rrp8Q9DB85 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rrp8Q9DB85 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rrp8Q9DB85 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rrp8Q9DB85 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rrp8Q9DB85 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rrp8Q9DB85 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.71■□□□□ 0.75
Rrp8Q9DB85 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.71■□□□□ 0.75
Rrp8Q9DB85 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Rrp8Q9DB85 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.71■□□□□ 0.75
Rrp8Q9DB85 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.7■□□□□ 0.74
Rrp8Q9DB85 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rrp8Q9DB85 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.7■□□□□ 0.74
Rrp8Q9DB85 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rrp8Q9DB85 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Rrp8Q9DB85 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rrp8Q9DB85 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rrp8Q9DB85 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rrp8Q9DB85 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rrp8Q9DB85 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.69■□□□□ 0.74
Rrp8Q9DB85 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rrp8Q9DB85 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.69■□□□□ 0.74
Rrp8Q9DB85 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.69■□□□□ 0.74
Rrp8Q9DB85 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rrp8Q9DB85 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rrp8Q9DB85 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rrp8Q9DB85 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rrp8Q9DB85 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.68■□□□□ 0.74
Rrp8Q9DB85 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rrp8Q9DB85 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rrp8Q9DB85 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.68■□□□□ 0.74
Rrp8Q9DB85 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rrp8Q9DB85 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rrp8Q9DB85 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.68■□□□□ 0.74
Rrp8Q9DB85 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Rrp8Q9DB85 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rrp8Q9DB85 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rrp8Q9DB85 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rrp8Q9DB85 Mir6236-201ENSMUST00000184437 123 ntBASIC19.67■□□□□ 0.74
Rrp8Q9DB85 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rrp8Q9DB85 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rrp8Q9DB85 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rrp8Q9DB85 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms