Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Tmem54Q9D7S1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Tmem54Q9D7S1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Tmem54Q9D7S1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tmem54Q9D7S1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tmem54Q9D7S1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tmem54Q9D7S1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tmem54Q9D7S1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tmem54Q9D7S1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tmem54Q9D7S1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tmem54Q9D7S1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tmem54Q9D7S1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tmem54Q9D7S1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Tmem54Q9D7S1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.63■□□□□ 0.41
Tmem54Q9D7S1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Tmem54Q9D7S1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tmem54Q9D7S1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tmem54Q9D7S1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tmem54Q9D7S1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Tmem54Q9D7S1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Tmem54Q9D7S1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.63■□□□□ 0.41
Tmem54Q9D7S1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tmem54Q9D7S1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tmem54Q9D7S1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Tmem54Q9D7S1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tmem54Q9D7S1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tmem54Q9D7S1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tmem54Q9D7S1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tmem54Q9D7S1 Mir6236-201ENSMUST00000184437 123 ntBASIC17.62■□□□□ 0.41
Tmem54Q9D7S1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tmem54Q9D7S1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tmem54Q9D7S1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tmem54Q9D7S1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Tmem54Q9D7S1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tmem54Q9D7S1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tmem54Q9D7S1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tmem54Q9D7S1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tmem54Q9D7S1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tmem54Q9D7S1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tmem54Q9D7S1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Tmem54Q9D7S1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmem54Q9D7S1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmem54Q9D7S1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmem54Q9D7S1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmem54Q9D7S1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmem54Q9D7S1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tmem54Q9D7S1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tmem54Q9D7S1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tmem54Q9D7S1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tmem54Q9D7S1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Tmem54Q9D7S1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tmem54Q9D7S1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.6■□□□□ 0.41
Tmem54Q9D7S1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tmem54Q9D7S1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tmem54Q9D7S1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tmem54Q9D7S1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tmem54Q9D7S1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tmem54Q9D7S1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tmem54Q9D7S1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.59■□□□□ 0.41
Tmem54Q9D7S1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmem54Q9D7S1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmem54Q9D7S1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmem54Q9D7S1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmem54Q9D7S1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tmem54Q9D7S1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.59■□□□□ 0.41
Tmem54Q9D7S1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmem54Q9D7S1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmem54Q9D7S1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Tmem54Q9D7S1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmem54Q9D7S1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tmem54Q9D7S1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmem54Q9D7S1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tmem54Q9D7S1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tmem54Q9D7S1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Tmem54Q9D7S1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Tmem54Q9D7S1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Tmem54Q9D7S1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.58■□□□□ 0.41
Tmem54Q9D7S1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tmem54Q9D7S1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tmem54Q9D7S1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Tmem54Q9D7S1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tmem54Q9D7S1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Tmem54Q9D7S1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tmem54Q9D7S1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tmem54Q9D7S1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tmem54Q9D7S1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tmem54Q9D7S1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.57■□□□□ 0.4
Tmem54Q9D7S1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Tmem54Q9D7S1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.57■□□□□ 0.4
Tmem54Q9D7S1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.57■□□□□ 0.4
Tmem54Q9D7S1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tmem54Q9D7S1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tmem54Q9D7S1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tmem54Q9D7S1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmem54Q9D7S1 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.56■□□□□ 0.4
Tmem54Q9D7S1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tmem54Q9D7S1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Tmem54Q9D7S1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tmem54Q9D7S1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Tmem54Q9D7S1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms