Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Vps4aQ8VEJ9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Vps4aQ8VEJ9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vps4aQ8VEJ9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vps4aQ8VEJ9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.38■□□□□ 0.69
Vps4aQ8VEJ9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Vps4aQ8VEJ9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps4aQ8VEJ9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps4aQ8VEJ9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.38■□□□□ 0.69
Vps4aQ8VEJ9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps4aQ8VEJ9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps4aQ8VEJ9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps4aQ8VEJ9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Vps4aQ8VEJ9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.38■□□□□ 0.69
Vps4aQ8VEJ9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vps4aQ8VEJ9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Vps4aQ8VEJ9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Vps4aQ8VEJ9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps4aQ8VEJ9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps4aQ8VEJ9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps4aQ8VEJ9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps4aQ8VEJ9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.37■□□□□ 0.69
Vps4aQ8VEJ9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps4aQ8VEJ9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps4aQ8VEJ9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps4aQ8VEJ9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps4aQ8VEJ9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vps4aQ8VEJ9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.37■□□□□ 0.69
Vps4aQ8VEJ9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vps4aQ8VEJ9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vps4aQ8VEJ9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Vps4aQ8VEJ9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps4aQ8VEJ9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.36■□□□□ 0.69
Vps4aQ8VEJ9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps4aQ8VEJ9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Vps4aQ8VEJ9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps4aQ8VEJ9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.36■□□□□ 0.69
Vps4aQ8VEJ9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps4aQ8VEJ9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vps4aQ8VEJ9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps4aQ8VEJ9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Vps4aQ8VEJ9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps4aQ8VEJ9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Vps4aQ8VEJ9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Vps4aQ8VEJ9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.35■□□□□ 0.69
Vps4aQ8VEJ9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps4aQ8VEJ9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps4aQ8VEJ9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Vps4aQ8VEJ9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps4aQ8VEJ9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vps4aQ8VEJ9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps4aQ8VEJ9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps4aQ8VEJ9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.34■□□□□ 0.69
Vps4aQ8VEJ9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.34■□□□□ 0.69
Vps4aQ8VEJ9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.34■□□□□ 0.69
Vps4aQ8VEJ9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Vps4aQ8VEJ9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps4aQ8VEJ9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps4aQ8VEJ9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.34■□□□□ 0.69
Vps4aQ8VEJ9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vps4aQ8VEJ9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps4aQ8VEJ9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps4aQ8VEJ9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps4aQ8VEJ9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps4aQ8VEJ9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vps4aQ8VEJ9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps4aQ8VEJ9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Vps4aQ8VEJ9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Vps4aQ8VEJ9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps4aQ8VEJ9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps4aQ8VEJ9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps4aQ8VEJ9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Vps4aQ8VEJ9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Vps4aQ8VEJ9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vps4aQ8VEJ9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Vps4aQ8VEJ9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps4aQ8VEJ9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps4aQ8VEJ9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps4aQ8VEJ9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vps4aQ8VEJ9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps4aQ8VEJ9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vps4aQ8VEJ9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vps4aQ8VEJ9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Vps4aQ8VEJ9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vps4aQ8VEJ9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.32■□□□□ 0.68
Vps4aQ8VEJ9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Vps4aQ8VEJ9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps4aQ8VEJ9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vps4aQ8VEJ9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps4aQ8VEJ9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps4aQ8VEJ9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Vps4aQ8VEJ9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps4aQ8VEJ9 Gm27454-201ENSMUST00000185090 204 ntBASIC19.31■□□□□ 0.68
Vps4aQ8VEJ9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps4aQ8VEJ9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps4aQ8VEJ9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps4aQ8VEJ9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps4aQ8VEJ9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps4aQ8VEJ9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vps4aQ8VEJ9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms