Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Chmp7Q8R1T1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Chmp7Q8R1T1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Chmp7Q8R1T1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Chmp7Q8R1T1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC25.92■■□□□ 1.74
Chmp7Q8R1T1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Chmp7Q8R1T1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Chmp7Q8R1T1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Chmp7Q8R1T1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Chmp7Q8R1T1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Chmp7Q8R1T1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC25.91■■□□□ 1.74
Chmp7Q8R1T1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Chmp7Q8R1T1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC25.91■■□□□ 1.74
Chmp7Q8R1T1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Chmp7Q8R1T1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Chmp7Q8R1T1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Chmp7Q8R1T1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Chmp7Q8R1T1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Chmp7Q8R1T1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Chmp7Q8R1T1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC25.9■■□□□ 1.74
Chmp7Q8R1T1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Chmp7Q8R1T1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
Chmp7Q8R1T1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Chmp7Q8R1T1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
Chmp7Q8R1T1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC25.89■■□□□ 1.74
Chmp7Q8R1T1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Chmp7Q8R1T1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
Chmp7Q8R1T1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Chmp7Q8R1T1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Chmp7Q8R1T1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Chmp7Q8R1T1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Chmp7Q8R1T1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Chmp7Q8R1T1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Chmp7Q8R1T1 Gm18671-201ENSMUST00000214826 683 ntBASIC25.88■■□□□ 1.73
Chmp7Q8R1T1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
Chmp7Q8R1T1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Chmp7Q8R1T1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Chmp7Q8R1T1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC25.88■■□□□ 1.73
Chmp7Q8R1T1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Chmp7Q8R1T1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC25.87■■□□□ 1.73
Chmp7Q8R1T1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC25.87■■□□□ 1.73
Chmp7Q8R1T1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Chmp7Q8R1T1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC25.87■■□□□ 1.73
Chmp7Q8R1T1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC25.87■■□□□ 1.73
Chmp7Q8R1T1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Chmp7Q8R1T1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Chmp7Q8R1T1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Chmp7Q8R1T1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Chmp7Q8R1T1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Chmp7Q8R1T1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Chmp7Q8R1T1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Chmp7Q8R1T1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Chmp7Q8R1T1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Chmp7Q8R1T1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Chmp7Q8R1T1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Chmp7Q8R1T1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Chmp7Q8R1T1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Chmp7Q8R1T1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Chmp7Q8R1T1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC25.84■■□□□ 1.73
Chmp7Q8R1T1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
Chmp7Q8R1T1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Chmp7Q8R1T1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Chmp7Q8R1T1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Chmp7Q8R1T1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Chmp7Q8R1T1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Chmp7Q8R1T1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC25.83■■□□□ 1.73
Chmp7Q8R1T1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC25.83■■□□□ 1.73
Chmp7Q8R1T1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
Chmp7Q8R1T1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Chmp7Q8R1T1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
Chmp7Q8R1T1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Chmp7Q8R1T1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC25.83■■□□□ 1.72
Chmp7Q8R1T1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Chmp7Q8R1T1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Chmp7Q8R1T1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Chmp7Q8R1T1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Chmp7Q8R1T1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
Chmp7Q8R1T1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Chmp7Q8R1T1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Chmp7Q8R1T1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Chmp7Q8R1T1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Chmp7Q8R1T1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Chmp7Q8R1T1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC25.81■■□□□ 1.72
Chmp7Q8R1T1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
Chmp7Q8R1T1 Gm10033-202ENSMUST00000211874 928 ntBASIC25.81■■□□□ 1.72
Chmp7Q8R1T1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC25.81■■□□□ 1.72
Chmp7Q8R1T1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Chmp7Q8R1T1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Chmp7Q8R1T1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Chmp7Q8R1T1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Chmp7Q8R1T1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
Chmp7Q8R1T1 Gm37179-201ENSMUST00000194862 823 ntBASIC25.8■■□□□ 1.72
Chmp7Q8R1T1 Gm42778-201ENSMUST00000199644 553 ntBASIC25.8■■□□□ 1.72
Chmp7Q8R1T1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Chmp7Q8R1T1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Chmp7Q8R1T1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC25.79■■□□□ 1.72
Chmp7Q8R1T1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC25.79■■□□□ 1.72
Chmp7Q8R1T1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC25.79■■□□□ 1.72
Chmp7Q8R1T1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC25.79■■□□□ 1.72
Chmp7Q8R1T1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms