Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Tm6sf2Q8R1J1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tm6sf2Q8R1J1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tm6sf2Q8R1J1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Tm6sf2Q8R1J1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm6sf2Q8R1J1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm6sf2Q8R1J1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm6sf2Q8R1J1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.91■□□□□ 0.62
Tm6sf2Q8R1J1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm6sf2Q8R1J1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm6sf2Q8R1J1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm6sf2Q8R1J1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm6sf2Q8R1J1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm6sf2Q8R1J1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tm6sf2Q8R1J1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Tm6sf2Q8R1J1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tm6sf2Q8R1J1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tm6sf2Q8R1J1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tm6sf2Q8R1J1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.9■□□□□ 0.62
Tm6sf2Q8R1J1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tm6sf2Q8R1J1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.9■□□□□ 0.62
Tm6sf2Q8R1J1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Tm6sf2Q8R1J1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Tm6sf2Q8R1J1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tm6sf2Q8R1J1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tm6sf2Q8R1J1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tm6sf2Q8R1J1 Gm15039-201ENSMUST00000118914 875 ntBASIC18.89■□□□□ 0.61
Tm6sf2Q8R1J1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.89■□□□□ 0.61
Tm6sf2Q8R1J1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tm6sf2Q8R1J1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tm6sf2Q8R1J1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Tm6sf2Q8R1J1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tm6sf2Q8R1J1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tm6sf2Q8R1J1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tm6sf2Q8R1J1 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.88■□□□□ 0.61
Tm6sf2Q8R1J1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Tm6sf2Q8R1J1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tm6sf2Q8R1J1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tm6sf2Q8R1J1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tm6sf2Q8R1J1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tm6sf2Q8R1J1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tm6sf2Q8R1J1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tm6sf2Q8R1J1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.87■□□□□ 0.61
Tm6sf2Q8R1J1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tm6sf2Q8R1J1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tm6sf2Q8R1J1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tm6sf2Q8R1J1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tm6sf2Q8R1J1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tm6sf2Q8R1J1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tm6sf2Q8R1J1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.87■□□□□ 0.61
Tm6sf2Q8R1J1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Tm6sf2Q8R1J1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tm6sf2Q8R1J1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tm6sf2Q8R1J1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tm6sf2Q8R1J1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tm6sf2Q8R1J1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tm6sf2Q8R1J1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tm6sf2Q8R1J1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tm6sf2Q8R1J1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.85■□□□□ 0.61
Tm6sf2Q8R1J1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tm6sf2Q8R1J1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tm6sf2Q8R1J1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tm6sf2Q8R1J1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Tm6sf2Q8R1J1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tm6sf2Q8R1J1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tm6sf2Q8R1J1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Tm6sf2Q8R1J1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
Tm6sf2Q8R1J1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.84■□□□□ 0.61
Tm6sf2Q8R1J1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.84■□□□□ 0.61
Tm6sf2Q8R1J1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
Tm6sf2Q8R1J1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tm6sf2Q8R1J1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tm6sf2Q8R1J1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tm6sf2Q8R1J1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Tm6sf2Q8R1J1 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.83■□□□□ 0.61
Tm6sf2Q8R1J1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tm6sf2Q8R1J1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tm6sf2Q8R1J1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tm6sf2Q8R1J1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tm6sf2Q8R1J1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.83■□□□□ 0.6
Tm6sf2Q8R1J1 Mir7075-201ENSMUST00000184187 82 ntBASIC18.83■□□□□ 0.6
Tm6sf2Q8R1J1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tm6sf2Q8R1J1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.83■□□□□ 0.6
Tm6sf2Q8R1J1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tm6sf2Q8R1J1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tm6sf2Q8R1J1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tm6sf2Q8R1J1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tm6sf2Q8R1J1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tm6sf2Q8R1J1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tm6sf2Q8R1J1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tm6sf2Q8R1J1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tm6sf2Q8R1J1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tm6sf2Q8R1J1 Mir6236-201ENSMUST00000184437 123 ntBASIC18.82■□□□□ 0.6
Tm6sf2Q8R1J1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tm6sf2Q8R1J1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tm6sf2Q8R1J1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tm6sf2Q8R1J1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tm6sf2Q8R1J1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tm6sf2Q8R1J1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tm6sf2Q8R1J1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms