Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PdgfcQ8CI19 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PdgfcQ8CI19 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PdgfcQ8CI19 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC22.39■■□□□ 1.18
PdgfcQ8CI19 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PdgfcQ8CI19 Gm18671-201ENSMUST00000214826 683 ntBASIC22.39■■□□□ 1.17
PdgfcQ8CI19 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PdgfcQ8CI19 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PdgfcQ8CI19 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.38■■□□□ 1.17
PdgfcQ8CI19 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PdgfcQ8CI19 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PdgfcQ8CI19 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PdgfcQ8CI19 Gm11421-201ENSMUST00000122124 294 ntBASIC22.38■■□□□ 1.17
PdgfcQ8CI19 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PdgfcQ8CI19 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PdgfcQ8CI19 Spcs1-207ENSMUST00000228767 1008 ntBASIC22.38■■□□□ 1.17
PdgfcQ8CI19 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PdgfcQ8CI19 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
PdgfcQ8CI19 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PdgfcQ8CI19 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC22.38■■□□□ 1.17
PdgfcQ8CI19 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PdgfcQ8CI19 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.38■■□□□ 1.17
PdgfcQ8CI19 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PdgfcQ8CI19 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.37■■□□□ 1.17
PdgfcQ8CI19 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PdgfcQ8CI19 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PdgfcQ8CI19 AV356131-201ENSMUST00000206201 750 ntBASIC22.37■■□□□ 1.17
PdgfcQ8CI19 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
PdgfcQ8CI19 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PdgfcQ8CI19 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PdgfcQ8CI19 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
PdgfcQ8CI19 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC22.36■■□□□ 1.17
PdgfcQ8CI19 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
PdgfcQ8CI19 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PdgfcQ8CI19 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PdgfcQ8CI19 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PdgfcQ8CI19 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PdgfcQ8CI19 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PdgfcQ8CI19 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PdgfcQ8CI19 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PdgfcQ8CI19 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC22.33■■□□□ 1.17
PdgfcQ8CI19 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
PdgfcQ8CI19 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PdgfcQ8CI19 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PdgfcQ8CI19 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PdgfcQ8CI19 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
PdgfcQ8CI19 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PdgfcQ8CI19 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
PdgfcQ8CI19 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PdgfcQ8CI19 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
PdgfcQ8CI19 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC22.32■■□□□ 1.16
PdgfcQ8CI19 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC22.32■■□□□ 1.16
PdgfcQ8CI19 Gm42778-201ENSMUST00000199644 553 ntBASIC22.32■■□□□ 1.16
PdgfcQ8CI19 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PdgfcQ8CI19 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
PdgfcQ8CI19 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PdgfcQ8CI19 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
PdgfcQ8CI19 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PdgfcQ8CI19 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PdgfcQ8CI19 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PdgfcQ8CI19 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PdgfcQ8CI19 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PdgfcQ8CI19 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PdgfcQ8CI19 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PdgfcQ8CI19 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PdgfcQ8CI19 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PdgfcQ8CI19 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.3■■□□□ 1.16
PdgfcQ8CI19 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PdgfcQ8CI19 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PdgfcQ8CI19 CT025689.6-201ENSMUST00000224991 1104 ntBASIC22.29■■□□□ 1.16
PdgfcQ8CI19 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PdgfcQ8CI19 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PdgfcQ8CI19 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PdgfcQ8CI19 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PdgfcQ8CI19 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PdgfcQ8CI19 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PdgfcQ8CI19 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PdgfcQ8CI19 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PdgfcQ8CI19 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PdgfcQ8CI19 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PdgfcQ8CI19 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
PdgfcQ8CI19 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PdgfcQ8CI19 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PdgfcQ8CI19 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PdgfcQ8CI19 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PdgfcQ8CI19 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.27■■□□□ 1.16
PdgfcQ8CI19 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC22.27■■□□□ 1.16
PdgfcQ8CI19 Mir6236-201ENSMUST00000184437 123 ntBASIC22.27■■□□□ 1.16
PdgfcQ8CI19 AC112142.1-201ENSMUST00000228796 918 ntBASIC22.27■■□□□ 1.16
PdgfcQ8CI19 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PdgfcQ8CI19 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PdgfcQ8CI19 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PdgfcQ8CI19 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
PdgfcQ8CI19 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PdgfcQ8CI19 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PdgfcQ8CI19 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PdgfcQ8CI19 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.26■■□□□ 1.15
PdgfcQ8CI19 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.26■■□□□ 1.15
PdgfcQ8CI19 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PdgfcQ8CI19 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms