Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rft1Q8C3B8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Rft1Q8C3B8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rft1Q8C3B8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rft1Q8C3B8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.79■□□□□ 0.44
Rft1Q8C3B8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rft1Q8C3B8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rft1Q8C3B8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Rft1Q8C3B8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rft1Q8C3B8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rft1Q8C3B8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rft1Q8C3B8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Rft1Q8C3B8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rft1Q8C3B8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rft1Q8C3B8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.78■□□□□ 0.44
Rft1Q8C3B8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rft1Q8C3B8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rft1Q8C3B8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rft1Q8C3B8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.77■□□□□ 0.44
Rft1Q8C3B8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rft1Q8C3B8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rft1Q8C3B8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rft1Q8C3B8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Rft1Q8C3B8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rft1Q8C3B8 Rps24-207ENSMUST00000224568 714 ntBASIC17.77■□□□□ 0.44
Rft1Q8C3B8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rft1Q8C3B8 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.77■□□□□ 0.43
Rft1Q8C3B8 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rft1Q8C3B8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Rft1Q8C3B8 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.77■□□□□ 0.43
Rft1Q8C3B8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.77■□□□□ 0.43
Rft1Q8C3B8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rft1Q8C3B8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rft1Q8C3B8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rft1Q8C3B8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rft1Q8C3B8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.76■□□□□ 0.43
Rft1Q8C3B8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rft1Q8C3B8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rft1Q8C3B8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rft1Q8C3B8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rft1Q8C3B8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.76■□□□□ 0.43
Rft1Q8C3B8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rft1Q8C3B8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rft1Q8C3B8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rft1Q8C3B8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rft1Q8C3B8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rft1Q8C3B8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rft1Q8C3B8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.75■□□□□ 0.43
Rft1Q8C3B8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.75■□□□□ 0.43
Rft1Q8C3B8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.75■□□□□ 0.43
Rft1Q8C3B8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rft1Q8C3B8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rft1Q8C3B8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rft1Q8C3B8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rft1Q8C3B8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rft1Q8C3B8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rft1Q8C3B8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rft1Q8C3B8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rft1Q8C3B8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rft1Q8C3B8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rft1Q8C3B8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.74■□□□□ 0.43
Rft1Q8C3B8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rft1Q8C3B8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rft1Q8C3B8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.74■□□□□ 0.43
Rft1Q8C3B8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.74■□□□□ 0.43
Rft1Q8C3B8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.74■□□□□ 0.43
Rft1Q8C3B8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rft1Q8C3B8 Gm9959-201ENSMUST00000068277 390 ntBASIC17.74■□□□□ 0.43
Rft1Q8C3B8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rft1Q8C3B8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rft1Q8C3B8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rft1Q8C3B8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.74■□□□□ 0.43
Rft1Q8C3B8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rft1Q8C3B8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rft1Q8C3B8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rft1Q8C3B8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rft1Q8C3B8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rft1Q8C3B8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rft1Q8C3B8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rft1Q8C3B8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rft1Q8C3B8 Gm45102-201ENSMUST00000207427 857 ntBASIC17.73■□□□□ 0.43
Rft1Q8C3B8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.73■□□□□ 0.43
Rft1Q8C3B8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rft1Q8C3B8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rft1Q8C3B8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rft1Q8C3B8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rft1Q8C3B8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rft1Q8C3B8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rft1Q8C3B8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rft1Q8C3B8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rft1Q8C3B8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rft1Q8C3B8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rft1Q8C3B8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rft1Q8C3B8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rft1Q8C3B8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rft1Q8C3B8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rft1Q8C3B8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rft1Q8C3B8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rft1Q8C3B8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
Rft1Q8C3B8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms