Protein–RNA interactions for Protein: Q8BSQ9

Pbrm1, Protein polybromo-1, mousemouse

Known RBP Predictions only

Length 1,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbrm1Q8BSQ9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Pbrm1Q8BSQ9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Pbrm1Q8BSQ9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
Pbrm1Q8BSQ9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Pbrm1Q8BSQ9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Pbrm1Q8BSQ9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
Pbrm1Q8BSQ9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Pbrm1Q8BSQ9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC32.34■■■□□ 2.77
Pbrm1Q8BSQ9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
Pbrm1Q8BSQ9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
Pbrm1Q8BSQ9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
Pbrm1Q8BSQ9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Pbrm1Q8BSQ9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
Pbrm1Q8BSQ9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Pbrm1Q8BSQ9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.77
Pbrm1Q8BSQ9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC32.32■■■□□ 2.77
Pbrm1Q8BSQ9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
Pbrm1Q8BSQ9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC32.32■■■□□ 2.76
Pbrm1Q8BSQ9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Pbrm1Q8BSQ9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Pbrm1Q8BSQ9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Pbrm1Q8BSQ9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC32.31■■■□□ 2.76
Pbrm1Q8BSQ9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Pbrm1Q8BSQ9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC32.31■■■□□ 2.76
Pbrm1Q8BSQ9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Pbrm1Q8BSQ9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
Pbrm1Q8BSQ9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC32.31■■■□□ 2.76
Pbrm1Q8BSQ9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Pbrm1Q8BSQ9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC32.31■■■□□ 2.76
Pbrm1Q8BSQ9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
Pbrm1Q8BSQ9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Pbrm1Q8BSQ9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC32.3■■■□□ 2.76
Pbrm1Q8BSQ9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Pbrm1Q8BSQ9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Pbrm1Q8BSQ9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Pbrm1Q8BSQ9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC32.29■■■□□ 2.76
Pbrm1Q8BSQ9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Pbrm1Q8BSQ9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC32.28■■■□□ 2.76
Pbrm1Q8BSQ9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Pbrm1Q8BSQ9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Pbrm1Q8BSQ9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
Pbrm1Q8BSQ9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Pbrm1Q8BSQ9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC32.27■■■□□ 2.76
Pbrm1Q8BSQ9 Gm22240-201ENSMUST00000175225 82 ntBASIC32.27■■■□□ 2.76
Pbrm1Q8BSQ9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC32.27■■■□□ 2.76
Pbrm1Q8BSQ9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Pbrm1Q8BSQ9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Pbrm1Q8BSQ9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Pbrm1Q8BSQ9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC32.26■■■□□ 2.75
Pbrm1Q8BSQ9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC32.26■■■□□ 2.75
Pbrm1Q8BSQ9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC32.26■■■□□ 2.75
Pbrm1Q8BSQ9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Pbrm1Q8BSQ9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC32.26■■■□□ 2.75
Pbrm1Q8BSQ9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Pbrm1Q8BSQ9 Mir7071-201ENSMUST00000184847 69 ntBASIC32.26■■■□□ 2.75
Pbrm1Q8BSQ9 Gm8520-201ENSMUST00000186517 868 ntBASIC32.25■■■□□ 2.75
Pbrm1Q8BSQ9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Pbrm1Q8BSQ9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Pbrm1Q8BSQ9 Gm10571-201ENSMUST00000097869 1638 ntBASIC32.24■■■□□ 2.75
Pbrm1Q8BSQ9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC32.24■■■□□ 2.75
Pbrm1Q8BSQ9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Pbrm1Q8BSQ9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Pbrm1Q8BSQ9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Pbrm1Q8BSQ9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Pbrm1Q8BSQ9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Pbrm1Q8BSQ9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC32.23■■■□□ 2.75
Pbrm1Q8BSQ9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Pbrm1Q8BSQ9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Pbrm1Q8BSQ9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Pbrm1Q8BSQ9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Pbrm1Q8BSQ9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Pbrm1Q8BSQ9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Pbrm1Q8BSQ9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC32.22■■■□□ 2.75
Pbrm1Q8BSQ9 Mir6236-201ENSMUST00000184437 123 ntBASIC32.22■■■□□ 2.75
Pbrm1Q8BSQ9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC32.22■■■□□ 2.75
Pbrm1Q8BSQ9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
Pbrm1Q8BSQ9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
Pbrm1Q8BSQ9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
Pbrm1Q8BSQ9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Pbrm1Q8BSQ9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC32.22■■■□□ 2.75
Pbrm1Q8BSQ9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Pbrm1Q8BSQ9 Gm13146-201ENSMUST00000118508 780 ntBASIC32.21■■■□□ 2.75
Pbrm1Q8BSQ9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
Pbrm1Q8BSQ9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Pbrm1Q8BSQ9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.75
Pbrm1Q8BSQ9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC32.2■■■□□ 2.75
Pbrm1Q8BSQ9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC32.2■■■□□ 2.74
Pbrm1Q8BSQ9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.74
Pbrm1Q8BSQ9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
Pbrm1Q8BSQ9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
Pbrm1Q8BSQ9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.74
Pbrm1Q8BSQ9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
Pbrm1Q8BSQ9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Pbrm1Q8BSQ9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC32.19■■■□□ 2.74
Pbrm1Q8BSQ9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC32.19■■■□□ 2.74
Pbrm1Q8BSQ9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
Pbrm1Q8BSQ9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Pbrm1Q8BSQ9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Pbrm1Q8BSQ9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Pbrm1Q8BSQ9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC32.19■■■□□ 2.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms