Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ckap4Q8BMK4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ckap4Q8BMK4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.94■□□□□ 0.62
Ckap4Q8BMK4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ckap4Q8BMK4 Gm10399-202ENSMUST00000202768 748 ntBASIC18.94■□□□□ 0.62
Ckap4Q8BMK4 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.94■□□□□ 0.62
Ckap4Q8BMK4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ckap4Q8BMK4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ckap4Q8BMK4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ckap4Q8BMK4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ckap4Q8BMK4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ckap4Q8BMK4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ckap4Q8BMK4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.93■□□□□ 0.62
Ckap4Q8BMK4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap4Q8BMK4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap4Q8BMK4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap4Q8BMK4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap4Q8BMK4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap4Q8BMK4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap4Q8BMK4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.93■□□□□ 0.62
Ckap4Q8BMK4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap4Q8BMK4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap4Q8BMK4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap4Q8BMK4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.93■□□□□ 0.62
Ckap4Q8BMK4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.93■□□□□ 0.62
Ckap4Q8BMK4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap4Q8BMK4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap4Q8BMK4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ckap4Q8BMK4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap4Q8BMK4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap4Q8BMK4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.92■□□□□ 0.62
Ckap4Q8BMK4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap4Q8BMK4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap4Q8BMK4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap4Q8BMK4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ckap4Q8BMK4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap4Q8BMK4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap4Q8BMK4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap4Q8BMK4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap4Q8BMK4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap4Q8BMK4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap4Q8BMK4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ckap4Q8BMK4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap4Q8BMK4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ckap4Q8BMK4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Ckap4Q8BMK4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.91■□□□□ 0.62
Ckap4Q8BMK4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ckap4Q8BMK4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ckap4Q8BMK4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.9■□□□□ 0.62
Ckap4Q8BMK4 Gm15820-201ENSMUST00000201566 728 ntBASIC18.9■□□□□ 0.62
Ckap4Q8BMK4 Gm5812-201ENSMUST00000061073 957 ntBASIC18.9■□□□□ 0.62
Ckap4Q8BMK4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ckap4Q8BMK4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ckap4Q8BMK4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ckap4Q8BMK4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ckap4Q8BMK4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ckap4Q8BMK4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.89■□□□□ 0.61
Ckap4Q8BMK4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ckap4Q8BMK4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ckap4Q8BMK4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ckap4Q8BMK4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
Ckap4Q8BMK4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.89■□□□□ 0.61
Ckap4Q8BMK4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.89■□□□□ 0.61
Ckap4Q8BMK4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ckap4Q8BMK4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ckap4Q8BMK4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ckap4Q8BMK4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ckap4Q8BMK4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ckap4Q8BMK4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ckap4Q8BMK4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ckap4Q8BMK4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ckap4Q8BMK4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.88■□□□□ 0.61
Ckap4Q8BMK4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ckap4Q8BMK4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.88■□□□□ 0.61
Ckap4Q8BMK4 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.88■□□□□ 0.61
Ckap4Q8BMK4 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.88■□□□□ 0.61
Ckap4Q8BMK4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ckap4Q8BMK4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ckap4Q8BMK4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.88■□□□□ 0.61
Ckap4Q8BMK4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Ckap4Q8BMK4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.88■□□□□ 0.61
Ckap4Q8BMK4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ckap4Q8BMK4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ckap4Q8BMK4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ckap4Q8BMK4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ckap4Q8BMK4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.88■□□□□ 0.61
Ckap4Q8BMK4 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.87■□□□□ 0.61
Ckap4Q8BMK4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ckap4Q8BMK4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ckap4Q8BMK4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.87■□□□□ 0.61
Ckap4Q8BMK4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.87■□□□□ 0.61
Ckap4Q8BMK4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Ckap4Q8BMK4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ckap4Q8BMK4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ckap4Q8BMK4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ckap4Q8BMK4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ckap4Q8BMK4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ckap4Q8BMK4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
Ckap4Q8BMK4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ckap4Q8BMK4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms