Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm14281-201ENSMUST00000121700 1294 ntBASIC23.21■■□□□ 1.31
Ddx55Q6ZPL9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC23.21■■□□□ 1.31
Ddx55Q6ZPL9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC23.21■■□□□ 1.31
Ddx55Q6ZPL9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Ddx55Q6ZPL9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ddx55Q6ZPL9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ddx55Q6ZPL9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx55Q6ZPL9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx55Q6ZPL9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx55Q6ZPL9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx55Q6ZPL9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx55Q6ZPL9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx55Q6ZPL9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx55Q6ZPL9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx55Q6ZPL9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx55Q6ZPL9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC23.19■■□□□ 1.3
Ddx55Q6ZPL9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC23.19■■□□□ 1.3
Ddx55Q6ZPL9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC23.19■■□□□ 1.3
Ddx55Q6ZPL9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx55Q6ZPL9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC23.19■■□□□ 1.3
Ddx55Q6ZPL9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.19■■□□□ 1.3
Ddx55Q6ZPL9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx55Q6ZPL9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.18■■□□□ 1.3
Ddx55Q6ZPL9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ddx55Q6ZPL9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ddx55Q6ZPL9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ddx55Q6ZPL9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ddx55Q6ZPL9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ddx55Q6ZPL9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ddx55Q6ZPL9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ddx55Q6ZPL9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ddx55Q6ZPL9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx55Q6ZPL9 Gm13234-201ENSMUST00000120010 747 ntBASIC23.17■■□□□ 1.3
Ddx55Q6ZPL9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC23.17■■□□□ 1.3
Ddx55Q6ZPL9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx55Q6ZPL9 Gm5913-201ENSMUST00000119397 1399 ntBASIC23.16■■□□□ 1.3
Ddx55Q6ZPL9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx55Q6ZPL9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx55Q6ZPL9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC23.16■■□□□ 1.3
Ddx55Q6ZPL9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC23.16■■□□□ 1.3
Ddx55Q6ZPL9 Mir6236-201ENSMUST00000184437 123 ntBASIC23.16■■□□□ 1.3
Ddx55Q6ZPL9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Ddx55Q6ZPL9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC23.16■■□□□ 1.3
Ddx55Q6ZPL9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx55Q6ZPL9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Ddx55Q6ZPL9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx55Q6ZPL9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC23.15■■□□□ 1.3
Ddx55Q6ZPL9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
Ddx55Q6ZPL9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx55Q6ZPL9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ddx55Q6ZPL9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx55Q6ZPL9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC23.14■■□□□ 1.29
Ddx55Q6ZPL9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Ddx55Q6ZPL9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx55Q6ZPL9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx55Q6ZPL9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx55Q6ZPL9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx55Q6ZPL9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Ddx55Q6ZPL9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx55Q6ZPL9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx55Q6ZPL9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx55Q6ZPL9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
Ddx55Q6ZPL9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
Ddx55Q6ZPL9 Reep4-203ENSMUST00000226563 1444 ntBASIC23.13■■□□□ 1.29
Ddx55Q6ZPL9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
Ddx55Q6ZPL9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx55Q6ZPL9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx55Q6ZPL9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Ddx55Q6ZPL9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.12■■□□□ 1.29
Ddx55Q6ZPL9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Ddx55Q6ZPL9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx55Q6ZPL9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx55Q6ZPL9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx55Q6ZPL9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Ddx55Q6ZPL9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx55Q6ZPL9 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.11■■□□□ 1.29
Ddx55Q6ZPL9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx55Q6ZPL9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx55Q6ZPL9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Ddx55Q6ZPL9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx55Q6ZPL9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx55Q6ZPL9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
Ddx55Q6ZPL9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx55Q6ZPL9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx55Q6ZPL9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx55Q6ZPL9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx55Q6ZPL9 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.1■■□□□ 1.29
Ddx55Q6ZPL9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx55Q6ZPL9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Ddx55Q6ZPL9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx55Q6ZPL9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Ddx55Q6ZPL9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Ddx55Q6ZPL9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx55Q6ZPL9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx55Q6ZPL9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx55Q6ZPL9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx55Q6ZPL9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx55Q6ZPL9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC23.09■■□□□ 1.29
Ddx55Q6ZPL9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC23.09■■□□□ 1.29
Ddx55Q6ZPL9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms