Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm10602-201ENSMUST00000098239 609 ntBASIC23.38■■□□□ 1.33
Scn10aQ6QIY3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Scn10aQ6QIY3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Scn10aQ6QIY3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Scn10aQ6QIY3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Scn10aQ6QIY3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Scn10aQ6QIY3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Scn10aQ6QIY3 Gm9988-201ENSMUST00000069786 435 ntBASIC23.36■■□□□ 1.33
Scn10aQ6QIY3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Scn10aQ6QIY3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Scn10aQ6QIY3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Scn10aQ6QIY3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
Scn10aQ6QIY3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Scn10aQ6QIY3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
Scn10aQ6QIY3 Nespas-201ENSMUST00000143738 1083 ntBASIC23.34■■□□□ 1.33
Scn10aQ6QIY3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Scn10aQ6QIY3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
Scn10aQ6QIY3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Scn10aQ6QIY3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Scn10aQ6QIY3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Scn10aQ6QIY3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Scn10aQ6QIY3 Gm43403-201ENSMUST00000198011 1786 ntBASIC23.34■■□□□ 1.33
Scn10aQ6QIY3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC23.34■■□□□ 1.33
Scn10aQ6QIY3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC23.34■■□□□ 1.33
Scn10aQ6QIY3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Scn10aQ6QIY3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Scn10aQ6QIY3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Scn10aQ6QIY3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Scn10aQ6QIY3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Scn10aQ6QIY3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Scn10aQ6QIY3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Scn10aQ6QIY3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
Scn10aQ6QIY3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Scn10aQ6QIY3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Scn10aQ6QIY3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC23.32■■□□□ 1.32
Scn10aQ6QIY3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scn10aQ6QIY3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Scn10aQ6QIY3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scn10aQ6QIY3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scn10aQ6QIY3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scn10aQ6QIY3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC23.32■■□□□ 1.32
Scn10aQ6QIY3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Scn10aQ6QIY3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC23.31■■□□□ 1.32
Scn10aQ6QIY3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
Scn10aQ6QIY3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC23.31■■□□□ 1.32
Scn10aQ6QIY3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Scn10aQ6QIY3 Gm5913-201ENSMUST00000119397 1399 ntBASIC23.3■■□□□ 1.32
Scn10aQ6QIY3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Scn10aQ6QIY3 Gm12441-201ENSMUST00000121806 588 ntBASIC23.3■■□□□ 1.32
Scn10aQ6QIY3 Gm10653-202ENSMUST00000139570 835 ntBASIC23.3■■□□□ 1.32
Scn10aQ6QIY3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Scn10aQ6QIY3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Scn10aQ6QIY3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Scn10aQ6QIY3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Scn10aQ6QIY3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Scn10aQ6QIY3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Scn10aQ6QIY3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Scn10aQ6QIY3 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Scn10aQ6QIY3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Scn10aQ6QIY3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Scn10aQ6QIY3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Scn10aQ6QIY3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC23.28■■□□□ 1.32
Scn10aQ6QIY3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.28■■□□□ 1.32
Scn10aQ6QIY3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Scn10aQ6QIY3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Scn10aQ6QIY3 Mir6236-201ENSMUST00000184437 123 ntBASIC23.27■■□□□ 1.32
Scn10aQ6QIY3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Scn10aQ6QIY3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Scn10aQ6QIY3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Scn10aQ6QIY3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Scn10aQ6QIY3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Scn10aQ6QIY3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Scn10aQ6QIY3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Scn10aQ6QIY3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Scn10aQ6QIY3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Scn10aQ6QIY3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC23.26■■□□□ 1.31
Scn10aQ6QIY3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Scn10aQ6QIY3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Scn10aQ6QIY3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Scn10aQ6QIY3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Scn10aQ6QIY3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Scn10aQ6QIY3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Scn10aQ6QIY3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
Scn10aQ6QIY3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Scn10aQ6QIY3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Scn10aQ6QIY3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Scn10aQ6QIY3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Scn10aQ6QIY3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Scn10aQ6QIY3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Scn10aQ6QIY3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Scn10aQ6QIY3 Gm42555-201ENSMUST00000199304 1039 ntBASIC23.24■■□□□ 1.31
Scn10aQ6QIY3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Scn10aQ6QIY3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Scn10aQ6QIY3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Scn10aQ6QIY3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Scn10aQ6QIY3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.24■■□□□ 1.31
Scn10aQ6QIY3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Scn10aQ6QIY3 Gm4968-201ENSMUST00000071458 858 ntBASIC23.23■■□□□ 1.31
Scn10aQ6QIY3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Scn10aQ6QIY3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms