Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cep290Q6A078 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Cep290Q6A078 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cep290Q6A078 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Cep290Q6A078 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cep290Q6A078 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Cep290Q6A078 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cep290Q6A078 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.88■□□□□ 0.93
Cep290Q6A078 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cep290Q6A078 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cep290Q6A078 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cep290Q6A078 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
Cep290Q6A078 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.88■□□□□ 0.93
Cep290Q6A078 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cep290Q6A078 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.88■□□□□ 0.93
Cep290Q6A078 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cep290Q6A078 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cep290Q6A078 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cep290Q6A078 Gm7290-201ENSMUST00000104990 617 ntBASIC20.87■□□□□ 0.93
Cep290Q6A078 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cep290Q6A078 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Cep290Q6A078 Gm12918-201ENSMUST00000120234 636 ntBASIC20.87■□□□□ 0.93
Cep290Q6A078 Gm15710-201ENSMUST00000121821 636 ntBASIC20.87■□□□□ 0.93
Cep290Q6A078 Gm5075-201ENSMUST00000196916 622 ntBASIC20.87■□□□□ 0.93
Cep290Q6A078 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.87■□□□□ 0.93
Cep290Q6A078 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.87■□□□□ 0.93
Cep290Q6A078 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cep290Q6A078 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cep290Q6A078 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cep290Q6A078 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cep290Q6A078 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cep290Q6A078 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.86■□□□□ 0.93
Cep290Q6A078 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cep290Q6A078 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cep290Q6A078 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.86■□□□□ 0.93
Cep290Q6A078 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cep290Q6A078 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cep290Q6A078 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cep290Q6A078 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cep290Q6A078 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.86■□□□□ 0.93
Cep290Q6A078 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cep290Q6A078 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cep290Q6A078 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cep290Q6A078 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cep290Q6A078 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cep290Q6A078 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cep290Q6A078 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cep290Q6A078 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.85■□□□□ 0.93
Cep290Q6A078 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cep290Q6A078 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cep290Q6A078 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cep290Q6A078 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.85■□□□□ 0.93
Cep290Q6A078 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cep290Q6A078 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cep290Q6A078 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cep290Q6A078 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.84■□□□□ 0.93
Cep290Q6A078 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.84■□□□□ 0.93
Cep290Q6A078 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cep290Q6A078 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cep290Q6A078 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cep290Q6A078 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Cep290Q6A078 Gm6365-201ENSMUST00000054711 744 ntBASIC20.83■□□□□ 0.93
Cep290Q6A078 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.83■□□□□ 0.93
Cep290Q6A078 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Cep290Q6A078 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cep290Q6A078 Gm715-201ENSMUST00000117865 831 ntBASIC20.83■□□□□ 0.92
Cep290Q6A078 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cep290Q6A078 Gm5408-201ENSMUST00000197998 747 ntBASIC20.83■□□□□ 0.92
Cep290Q6A078 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cep290Q6A078 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cep290Q6A078 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cep290Q6A078 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.82■□□□□ 0.92
Cep290Q6A078 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cep290Q6A078 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cep290Q6A078 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cep290Q6A078 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Cep290Q6A078 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Cep290Q6A078 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.81■□□□□ 0.92
Cep290Q6A078 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cep290Q6A078 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cep290Q6A078 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cep290Q6A078 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cep290Q6A078 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cep290Q6A078 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.8■□□□□ 0.92
Cep290Q6A078 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.8■□□□□ 0.92
Cep290Q6A078 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.8■□□□□ 0.92
Cep290Q6A078 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cep290Q6A078 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cep290Q6A078 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Cep290Q6A078 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cep290Q6A078 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.79■□□□□ 0.92
Cep290Q6A078 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.79■□□□□ 0.92
Cep290Q6A078 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Cep290Q6A078 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cep290Q6A078 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.79■□□□□ 0.92
Cep290Q6A078 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cep290Q6A078 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cep290Q6A078 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.78■□□□□ 0.92
Cep290Q6A078 Trmt13-210ENSMUST00000198454 880 ntBASIC20.78■□□□□ 0.92
Cep290Q6A078 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms