Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Mir6982-201ENSMUST00000184354 68 ntBASIC19.4■□□□□ 0.7
AtmQ62388 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
AtmQ62388 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.4■□□□□ 0.7
AtmQ62388 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AtmQ62388 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AtmQ62388 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AtmQ62388 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
AtmQ62388 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
AtmQ62388 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
AtmQ62388 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
AtmQ62388 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
AtmQ62388 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.38■□□□□ 0.69
AtmQ62388 Reep4-203ENSMUST00000226563 1444 ntBASIC19.38■□□□□ 0.69
AtmQ62388 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
AtmQ62388 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
AtmQ62388 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AtmQ62388 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
AtmQ62388 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.38■□□□□ 0.69
AtmQ62388 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
AtmQ62388 Gm8520-201ENSMUST00000186517 868 ntBASIC19.38■□□□□ 0.69
AtmQ62388 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AtmQ62388 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AtmQ62388 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AtmQ62388 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AtmQ62388 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
AtmQ62388 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
AtmQ62388 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.37■□□□□ 0.69
AtmQ62388 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.36■□□□□ 0.69
AtmQ62388 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.36■□□□□ 0.69
AtmQ62388 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AtmQ62388 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
AtmQ62388 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.36■□□□□ 0.69
AtmQ62388 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AtmQ62388 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AtmQ62388 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.36■□□□□ 0.69
AtmQ62388 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AtmQ62388 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
AtmQ62388 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AtmQ62388 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.35■□□□□ 0.69
AtmQ62388 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.35■□□□□ 0.69
AtmQ62388 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AtmQ62388 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AtmQ62388 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
AtmQ62388 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
AtmQ62388 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
AtmQ62388 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
AtmQ62388 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.34■□□□□ 0.69
AtmQ62388 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AtmQ62388 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
AtmQ62388 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AtmQ62388 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
AtmQ62388 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AtmQ62388 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.34■□□□□ 0.69
AtmQ62388 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
AtmQ62388 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
AtmQ62388 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.33■□□□□ 0.68
AtmQ62388 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
AtmQ62388 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
AtmQ62388 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
AtmQ62388 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.32■□□□□ 0.68
AtmQ62388 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AtmQ62388 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AtmQ62388 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AtmQ62388 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AtmQ62388 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AtmQ62388 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
AtmQ62388 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
AtmQ62388 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AtmQ62388 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.31■□□□□ 0.68
AtmQ62388 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
AtmQ62388 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AtmQ62388 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
AtmQ62388 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
AtmQ62388 Mir5133-201ENSMUST00000174955 77 ntBASIC19.31■□□□□ 0.68
AtmQ62388 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AtmQ62388 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AtmQ62388 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
AtmQ62388 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AtmQ62388 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AtmQ62388 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.3■□□□□ 0.68
AtmQ62388 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AtmQ62388 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AtmQ62388 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AtmQ62388 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AtmQ62388 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AtmQ62388 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.3■□□□□ 0.68
AtmQ62388 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AtmQ62388 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AtmQ62388 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AtmQ62388 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AtmQ62388 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
AtmQ62388 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.29■□□□□ 0.68
AtmQ62388 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
AtmQ62388 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AtmQ62388 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
AtmQ62388 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AtmQ62388 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
AtmQ62388 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AtmQ62388 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
AtmQ62388 Gm13168-201ENSMUST00000121771 632 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms