Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Six3Q62233 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.68■□□□□ 0.74
Six3Q62233 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.68■□□□□ 0.74
Six3Q62233 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Six3Q62233 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Six3Q62233 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six3Q62233 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six3Q62233 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six3Q62233 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six3Q62233 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Six3Q62233 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Six3Q62233 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six3Q62233 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six3Q62233 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six3Q62233 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six3Q62233 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six3Q62233 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Six3Q62233 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.67■□□□□ 0.74
Six3Q62233 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Six3Q62233 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Six3Q62233 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Six3Q62233 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six3Q62233 Golph3-202ENSMUST00000226517 2359 ntBASIC19.66■□□□□ 0.74
Six3Q62233 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six3Q62233 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Six3Q62233 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Six3Q62233 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six3Q62233 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six3Q62233 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six3Q62233 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six3Q62233 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six3Q62233 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six3Q62233 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six3Q62233 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Six3Q62233 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.66■□□□□ 0.74
Six3Q62233 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six3Q62233 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six3Q62233 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six3Q62233 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
Six3Q62233 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.65■□□□□ 0.74
Six3Q62233 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six3Q62233 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Six3Q62233 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six3Q62233 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six3Q62233 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six3Q62233 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six3Q62233 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six3Q62233 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Six3Q62233 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Six3Q62233 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Six3Q62233 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Six3Q62233 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
Six3Q62233 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six3Q62233 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.64■□□□□ 0.73
Six3Q62233 Gm15820-201ENSMUST00000201566 728 ntBASIC19.64■□□□□ 0.73
Six3Q62233 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.64■□□□□ 0.73
Six3Q62233 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six3Q62233 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six3Q62233 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Six3Q62233 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Six3Q62233 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Six3Q62233 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Six3Q62233 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Six3Q62233 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Six3Q62233 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Six3Q62233 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Six3Q62233 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Six3Q62233 Gm7143-201ENSMUST00000222811 859 ntBASIC19.63■□□□□ 0.73
Six3Q62233 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Six3Q62233 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Six3Q62233 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Six3Q62233 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Six3Q62233 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Six3Q62233 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Six3Q62233 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Six3Q62233 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.62■□□□□ 0.73
Six3Q62233 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.62■□□□□ 0.73
Six3Q62233 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Six3Q62233 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Six3Q62233 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Six3Q62233 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six3Q62233 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Six3Q62233 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Six3Q62233 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.62■□□□□ 0.73
Six3Q62233 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six3Q62233 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six3Q62233 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Six3Q62233 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.61■□□□□ 0.73
Six3Q62233 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six3Q62233 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six3Q62233 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Six3Q62233 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Six3Q62233 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six3Q62233 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Six3Q62233 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six3Q62233 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six3Q62233 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Six3Q62233 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.6■□□□□ 0.73
Six3Q62233 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.6■□□□□ 0.73
Six3Q62233 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms