Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scarb1Q61009 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Scarb1Q61009 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scarb1Q61009 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scarb1Q61009 Gm14523-201ENSMUST00000117260 558 ntBASIC16.88■□□□□ 0.29
Scarb1Q61009 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.88■□□□□ 0.29
Scarb1Q61009 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Scarb1Q61009 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Scarb1Q61009 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scarb1Q61009 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Scarb1Q61009 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.87■□□□□ 0.29
Scarb1Q61009 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scarb1Q61009 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scarb1Q61009 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scarb1Q61009 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Scarb1Q61009 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.86■□□□□ 0.29
Scarb1Q61009 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Scarb1Q61009 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Scarb1Q61009 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scarb1Q61009 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scarb1Q61009 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scarb1Q61009 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.86■□□□□ 0.29
Scarb1Q61009 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scarb1Q61009 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scarb1Q61009 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scarb1Q61009 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scarb1Q61009 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scarb1Q61009 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scarb1Q61009 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scarb1Q61009 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scarb1Q61009 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Scarb1Q61009 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scarb1Q61009 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scarb1Q61009 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Scarb1Q61009 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scarb1Q61009 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scarb1Q61009 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Scarb1Q61009 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.85■□□□□ 0.29
Scarb1Q61009 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scarb1Q61009 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scarb1Q61009 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scarb1Q61009 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scarb1Q61009 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scarb1Q61009 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scarb1Q61009 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Scarb1Q61009 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.84■□□□□ 0.29
Scarb1Q61009 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scarb1Q61009 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.84■□□□□ 0.29
Scarb1Q61009 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.84■□□□□ 0.29
Scarb1Q61009 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Scarb1Q61009 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scarb1Q61009 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.84■□□□□ 0.29
Scarb1Q61009 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scarb1Q61009 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.84■□□□□ 0.29
Scarb1Q61009 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scarb1Q61009 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scarb1Q61009 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.84■□□□□ 0.29
Scarb1Q61009 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scarb1Q61009 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scarb1Q61009 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Scarb1Q61009 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scarb1Q61009 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.83■□□□□ 0.28
Scarb1Q61009 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scarb1Q61009 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.83■□□□□ 0.28
Scarb1Q61009 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.83■□□□□ 0.28
Scarb1Q61009 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scarb1Q61009 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scarb1Q61009 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scarb1Q61009 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scarb1Q61009 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scarb1Q61009 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scarb1Q61009 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scarb1Q61009 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scarb1Q61009 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scarb1Q61009 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarb1Q61009 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarb1Q61009 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Scarb1Q61009 Gm7332-201ENSMUST00000118351 454 ntBASIC16.82■□□□□ 0.28
Scarb1Q61009 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarb1Q61009 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.82■□□□□ 0.28
Scarb1Q61009 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.82■□□□□ 0.28
Scarb1Q61009 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scarb1Q61009 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scarb1Q61009 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Scarb1Q61009 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scarb1Q61009 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scarb1Q61009 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Scarb1Q61009 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scarb1Q61009 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Scarb1Q61009 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scarb1Q61009 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scarb1Q61009 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scarb1Q61009 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scarb1Q61009 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scarb1Q61009 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scarb1Q61009 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scarb1Q61009 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Scarb1Q61009 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scarb1Q61009 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scarb1Q61009 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms