Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.61■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.6■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.59■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.59■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.59■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav15-1-dv6-1Q5R1D2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.58■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.57■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.55■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.54■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.54■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.54■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.54■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav15-1-dv6-1Q5R1D2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms