Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf223Q3UV31 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf223Q3UV31 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rnf223Q3UV31 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf223Q3UV31 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.63■□□□□ 0.73
Rnf223Q3UV31 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf223Q3UV31 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf223Q3UV31 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf223Q3UV31 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf223Q3UV31 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
Rnf223Q3UV31 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Rnf223Q3UV31 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Rnf223Q3UV31 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.62■□□□□ 0.73
Rnf223Q3UV31 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.62■□□□□ 0.73
Rnf223Q3UV31 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rnf223Q3UV31 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rnf223Q3UV31 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf223Q3UV31 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf223Q3UV31 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf223Q3UV31 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf223Q3UV31 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf223Q3UV31 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
Rnf223Q3UV31 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.61■□□□□ 0.73
Rnf223Q3UV31 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rnf223Q3UV31 Mir6236-201ENSMUST00000184437 123 ntBASIC19.61■□□□□ 0.73
Rnf223Q3UV31 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.61■□□□□ 0.73
Rnf223Q3UV31 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf223Q3UV31 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf223Q3UV31 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf223Q3UV31 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Rnf223Q3UV31 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf223Q3UV31 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.61■□□□□ 0.73
Rnf223Q3UV31 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf223Q3UV31 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf223Q3UV31 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.6■□□□□ 0.73
Rnf223Q3UV31 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.6■□□□□ 0.73
Rnf223Q3UV31 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf223Q3UV31 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Rnf223Q3UV31 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.59■□□□□ 0.73
Rnf223Q3UV31 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf223Q3UV31 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf223Q3UV31 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf223Q3UV31 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf223Q3UV31 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf223Q3UV31 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf223Q3UV31 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Rnf223Q3UV31 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf223Q3UV31 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf223Q3UV31 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf223Q3UV31 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf223Q3UV31 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf223Q3UV31 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Rnf223Q3UV31 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf223Q3UV31 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf223Q3UV31 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf223Q3UV31 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rnf223Q3UV31 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf223Q3UV31 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnf223Q3UV31 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
Rnf223Q3UV31 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Rnf223Q3UV31 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.56■□□□□ 0.72
Rnf223Q3UV31 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.56■□□□□ 0.72
Rnf223Q3UV31 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf223Q3UV31 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf223Q3UV31 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf223Q3UV31 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf223Q3UV31 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rnf223Q3UV31 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf223Q3UV31 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.55■□□□□ 0.72
Rnf223Q3UV31 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf223Q3UV31 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Rnf223Q3UV31 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf223Q3UV31 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf223Q3UV31 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf223Q3UV31 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Rnf223Q3UV31 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf223Q3UV31 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf223Q3UV31 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf223Q3UV31 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf223Q3UV31 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf223Q3UV31 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf223Q3UV31 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf223Q3UV31 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf223Q3UV31 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rnf223Q3UV31 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf223Q3UV31 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf223Q3UV31 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf223Q3UV31 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rnf223Q3UV31 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rnf223Q3UV31 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf223Q3UV31 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf223Q3UV31 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf223Q3UV31 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rnf223Q3UV31 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf223Q3UV31 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf223Q3UV31 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
Rnf223Q3UV31 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf223Q3UV31 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf223Q3UV31 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf223Q3UV31 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms