Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.96■□□□□ 0.63
Spg11Q3UHA3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
Spg11Q3UHA3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Spg11Q3UHA3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Spg11Q3UHA3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.96■□□□□ 0.63
Spg11Q3UHA3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Spg11Q3UHA3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.96■□□□□ 0.63
Spg11Q3UHA3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Spg11Q3UHA3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Spg11Q3UHA3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Spg11Q3UHA3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Spg11Q3UHA3 Gm6576-201ENSMUST00000169678 883 ntBASIC18.95■□□□□ 0.62
Spg11Q3UHA3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Spg11Q3UHA3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Spg11Q3UHA3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.95■□□□□ 0.62
Spg11Q3UHA3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Spg11Q3UHA3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Spg11Q3UHA3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Spg11Q3UHA3 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.95■□□□□ 0.62
Spg11Q3UHA3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Spg11Q3UHA3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Spg11Q3UHA3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Spg11Q3UHA3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Spg11Q3UHA3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Spg11Q3UHA3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Spg11Q3UHA3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Spg11Q3UHA3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Spg11Q3UHA3 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.94■□□□□ 0.62
Spg11Q3UHA3 Gm27741-201ENSMUST00000185060 237 ntBASIC18.94■□□□□ 0.62
Spg11Q3UHA3 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.94■□□□□ 0.62
Spg11Q3UHA3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Spg11Q3UHA3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Spg11Q3UHA3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Spg11Q3UHA3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
Spg11Q3UHA3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Spg11Q3UHA3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Spg11Q3UHA3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Spg11Q3UHA3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Spg11Q3UHA3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.93■□□□□ 0.62
Spg11Q3UHA3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Spg11Q3UHA3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Spg11Q3UHA3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Spg11Q3UHA3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Spg11Q3UHA3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Spg11Q3UHA3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Spg11Q3UHA3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Spg11Q3UHA3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Spg11Q3UHA3 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.92■□□□□ 0.62
Spg11Q3UHA3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Spg11Q3UHA3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Spg11Q3UHA3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Spg11Q3UHA3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Spg11Q3UHA3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Spg11Q3UHA3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.92■□□□□ 0.62
Spg11Q3UHA3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Spg11Q3UHA3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.91■□□□□ 0.62
Spg11Q3UHA3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Spg11Q3UHA3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Spg11Q3UHA3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.91■□□□□ 0.62
Spg11Q3UHA3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Spg11Q3UHA3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Spg11Q3UHA3 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.9■□□□□ 0.62
Spg11Q3UHA3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Spg11Q3UHA3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Spg11Q3UHA3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Spg11Q3UHA3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.9■□□□□ 0.62
Spg11Q3UHA3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Spg11Q3UHA3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Spg11Q3UHA3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Spg11Q3UHA3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Spg11Q3UHA3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Spg11Q3UHA3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Spg11Q3UHA3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Spg11Q3UHA3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Spg11Q3UHA3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.89■□□□□ 0.61
Spg11Q3UHA3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Spg11Q3UHA3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Spg11Q3UHA3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Spg11Q3UHA3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Spg11Q3UHA3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Spg11Q3UHA3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Spg11Q3UHA3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Spg11Q3UHA3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Spg11Q3UHA3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Spg11Q3UHA3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Spg11Q3UHA3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Spg11Q3UHA3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.87■□□□□ 0.61
Spg11Q3UHA3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Spg11Q3UHA3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Spg11Q3UHA3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Spg11Q3UHA3 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.86■□□□□ 0.61
Spg11Q3UHA3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.86■□□□□ 0.61
Spg11Q3UHA3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Spg11Q3UHA3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Spg11Q3UHA3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Spg11Q3UHA3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Spg11Q3UHA3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.85■□□□□ 0.61
Spg11Q3UHA3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.85■□□□□ 0.61
Spg11Q3UHA3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.85■□□□□ 0.61
Spg11Q3UHA3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms