Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Vars2Q3U2A8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Vars2Q3U2A8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Vars2Q3U2A8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Vars2Q3U2A8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC25.59■■□□□ 1.69
Vars2Q3U2A8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Vars2Q3U2A8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Vars2Q3U2A8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Vars2Q3U2A8 AC135963.1-201ENSMUST00000211640 717 ntBASIC25.58■■□□□ 1.69
Vars2Q3U2A8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC25.58■■□□□ 1.68
Vars2Q3U2A8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Vars2Q3U2A8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Vars2Q3U2A8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Vars2Q3U2A8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC25.57■■□□□ 1.68
Vars2Q3U2A8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Vars2Q3U2A8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Vars2Q3U2A8 Gm13148-201ENSMUST00000118892 745 ntBASIC25.57■■□□□ 1.68
Vars2Q3U2A8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Vars2Q3U2A8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Vars2Q3U2A8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC25.56■■□□□ 1.68
Vars2Q3U2A8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Vars2Q3U2A8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Vars2Q3U2A8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Vars2Q3U2A8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Vars2Q3U2A8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Vars2Q3U2A8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Vars2Q3U2A8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC25.55■■□□□ 1.68
Vars2Q3U2A8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Vars2Q3U2A8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC25.55■■□□□ 1.68
Vars2Q3U2A8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Vars2Q3U2A8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Vars2Q3U2A8 Gm43859-201ENSMUST00000200075 1412 ntBASIC25.54■■□□□ 1.68
Vars2Q3U2A8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC25.54■■□□□ 1.68
Vars2Q3U2A8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Vars2Q3U2A8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC25.54■■□□□ 1.68
Vars2Q3U2A8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC25.54■■□□□ 1.68
Vars2Q3U2A8 Gm20049-201ENSMUST00000219950 730 ntBASIC25.54■■□□□ 1.68
Vars2Q3U2A8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
Vars2Q3U2A8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Vars2Q3U2A8 Gm10812-201ENSMUST00000099864 546 ntBASIC25.54■■□□□ 1.68
Vars2Q3U2A8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Vars2Q3U2A8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Vars2Q3U2A8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Vars2Q3U2A8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC25.53■■□□□ 1.68
Vars2Q3U2A8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
Vars2Q3U2A8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Vars2Q3U2A8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Vars2Q3U2A8 Mir6982-201ENSMUST00000184354 68 ntBASIC25.52■■□□□ 1.68
Vars2Q3U2A8 Gm5408-201ENSMUST00000197998 747 ntBASIC25.52■■□□□ 1.68
Vars2Q3U2A8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC25.52■■□□□ 1.68
Vars2Q3U2A8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Vars2Q3U2A8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Vars2Q3U2A8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Vars2Q3U2A8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Vars2Q3U2A8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
Vars2Q3U2A8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Vars2Q3U2A8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Vars2Q3U2A8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
Vars2Q3U2A8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC25.51■■□□□ 1.67
Vars2Q3U2A8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Vars2Q3U2A8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Vars2Q3U2A8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Vars2Q3U2A8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
Vars2Q3U2A8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC25.5■■□□□ 1.67
Vars2Q3U2A8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Vars2Q3U2A8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC25.5■■□□□ 1.67
Vars2Q3U2A8 AC135637.1-201ENSMUST00000227750 365 ntBASIC25.5■■□□□ 1.67
Vars2Q3U2A8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
Vars2Q3U2A8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Vars2Q3U2A8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Vars2Q3U2A8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC25.49■■□□□ 1.67
Vars2Q3U2A8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Vars2Q3U2A8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Vars2Q3U2A8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Vars2Q3U2A8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC25.48■■□□□ 1.67
Vars2Q3U2A8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Vars2Q3U2A8 Gm7290-201ENSMUST00000104990 617 ntBASIC25.47■■□□□ 1.67
Vars2Q3U2A8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC25.47■■□□□ 1.67
Vars2Q3U2A8 Gm12918-201ENSMUST00000120234 636 ntBASIC25.47■■□□□ 1.67
Vars2Q3U2A8 Gm15710-201ENSMUST00000121821 636 ntBASIC25.47■■□□□ 1.67
Vars2Q3U2A8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Vars2Q3U2A8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC25.47■■□□□ 1.67
Vars2Q3U2A8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC25.47■■□□□ 1.67
Vars2Q3U2A8 Gm5075-201ENSMUST00000196916 622 ntBASIC25.47■■□□□ 1.67
Vars2Q3U2A8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC25.47■■□□□ 1.67
Vars2Q3U2A8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC25.47■■□□□ 1.67
Vars2Q3U2A8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC25.47■■□□□ 1.67
Vars2Q3U2A8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Vars2Q3U2A8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Vars2Q3U2A8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC25.46■■□□□ 1.67
Vars2Q3U2A8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Vars2Q3U2A8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC25.46■■□□□ 1.67
Vars2Q3U2A8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC25.46■■□□□ 1.67
Vars2Q3U2A8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC25.46■■□□□ 1.67
Vars2Q3U2A8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Vars2Q3U2A8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Vars2Q3U2A8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Vars2Q3U2A8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Vars2Q3U2A8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Vars2Q3U2A8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms