Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf1P81269 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf1P81269 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf1P81269 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Atf1P81269 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Atf1P81269 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf1P81269 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf1P81269 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf1P81269 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atf1P81269 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atf1P81269 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atf1P81269 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Atf1P81269 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Atf1P81269 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.4■□□□□ 0.38
Atf1P81269 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Atf1P81269 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Atf1P81269 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atf1P81269 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Atf1P81269 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Atf1P81269 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.39■□□□□ 0.37
Atf1P81269 Gm15820-201ENSMUST00000201566 728 ntBASIC17.39■□□□□ 0.37
Atf1P81269 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atf1P81269 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atf1P81269 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atf1P81269 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atf1P81269 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Atf1P81269 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Atf1P81269 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.39■□□□□ 0.37
Atf1P81269 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.38■□□□□ 0.37
Atf1P81269 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atf1P81269 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.38■□□□□ 0.37
Atf1P81269 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Atf1P81269 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Atf1P81269 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Atf1P81269 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Atf1P81269 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf1P81269 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf1P81269 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.37■□□□□ 0.37
Atf1P81269 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf1P81269 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.37■□□□□ 0.37
Atf1P81269 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.37■□□□□ 0.37
Atf1P81269 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Atf1P81269 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Atf1P81269 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf1P81269 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf1P81269 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf1P81269 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Atf1P81269 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Atf1P81269 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.37■□□□□ 0.37
Atf1P81269 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Atf1P81269 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Atf1P81269 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Atf1P81269 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Atf1P81269 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Atf1P81269 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf1P81269 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf1P81269 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Atf1P81269 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Atf1P81269 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.36■□□□□ 0.37
Atf1P81269 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.36■□□□□ 0.37
Atf1P81269 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf1P81269 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Atf1P81269 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf1P81269 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Atf1P81269 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf1P81269 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf1P81269 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf1P81269 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf1P81269 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Atf1P81269 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf1P81269 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf1P81269 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf1P81269 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Atf1P81269 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Atf1P81269 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf1P81269 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf1P81269 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Atf1P81269 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf1P81269 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Atf1P81269 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf1P81269 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf1P81269 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Atf1P81269 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf1P81269 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.34■□□□□ 0.37
Atf1P81269 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf1P81269 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf1P81269 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atf1P81269 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf1P81269 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf1P81269 Gm5812-201ENSMUST00000061073 957 ntBASIC17.34■□□□□ 0.37
Atf1P81269 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Atf1P81269 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.34■□□□□ 0.37
Atf1P81269 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf1P81269 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Atf1P81269 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf1P81269 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf1P81269 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf1P81269 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Atf1P81269 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Atf1P81269 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms